RNA–Protein interactions for RNA: YLR058C

SHM2, Transcript of Cytosolic serine hydroxymethyltransferase, yeastyeast

Gene SHM2, Length 1,410 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHM2YLR058C YMR181CQ03231 154 aa8.24□□□□□ -1.09
SHM2YLR058C PAU20Q08322 120 aa8.24□□□□□ -1.09
SHM2YLR058C PAU9Q3E770 120 aa8.24□□□□□ -1.09
SHM2YLR058C YHR213WP0CI67 198 aa8.23□□□□□ -1.09
SHM2YLR058C POP5P28005 173 aa8.23□□□□□ -1.09
SHM2YLR058C SFT2P38166 215 aa8.23□□□□□ -1.09
SHM2YLR058C TOS8P53147 276 aa8.23□□□□□ -1.09
SHM2YLR058C HST4P53688 370 aa8.23□□□□□ -1.09
SHM2YLR058C YMR253CQ04835 414 aa8.23□□□□□ -1.09
SHM2YLR058C ERV2Q12284 196 aa8.23□□□□□ -1.09
SHM2YLR058C PCC1Q3E833 88 aa8.23□□□□□ -1.09
SHM2YLR058C TY1A-DR4O74302 440 aa8.22□□□□□ -1.09
SHM2YLR058C CYC3P06182 269 aa8.22□□□□□ -1.09
SHM2YLR058C TY1A-AP0CX57 440 aa8.22□□□□□ -1.09
SHM2YLR058C TY1A-PR1P0CX58 440 aa8.22□□□□□ -1.09
SHM2YLR058C TY1A-ORP0CX59 440 aa8.22□□□□□ -1.09
SHM2YLR058C TY1A-PR2P0CX60 440 aa8.22□□□□□ -1.09
SHM2YLR058C TY1A-DR5P0CX65 440 aa8.22□□□□□ -1.09
SHM2YLR058C TY1A-ER2P0CX66 440 aa8.22□□□□□ -1.09
SHM2YLR058C TY1A-GR3P0CX67 440 aa8.22□□□□□ -1.09
SHM2YLR058C TY1A-LR1P0CX68 440 aa8.22□□□□□ -1.09
SHM2YLR058C TY1A-MR2P0CX69 440 aa8.22□□□□□ -1.09
SHM2YLR058C RPS2P25443 254 aaKnown RBP8.22□□□□□ -1.09
SHM2YLR058C RPS0AP32905 252 aaKnown RBP8.22□□□□□ -1.09
SHM2YLR058C TRS20P38334 175 aa8.22□□□□□ -1.09
SHM2YLR058C MIC12P38341 106 aa8.22□□□□□ -1.09
SHM2YLR058C SNU13P39990 126 aaKnown RBP8.22□□□□□ -1.09
SHM2YLR058C FIP1P45976 327 aa8.22□□□□□ -1.09
SHM2YLR058C YJL027CP47063 138 aaPredicted RBP8.22□□□□□ -1.09
SHM2YLR058C TY1A-JR2P47099 440 aa8.22□□□□□ -1.09
SHM2YLR058C CAB4P53332 305 aa8.22□□□□□ -1.09
SHM2YLR058C TY1A-DR1Q03856 440 aa8.22□□□□□ -1.09
SHM2YLR058C TY1A-ML1Q04706 440 aaKnown RBP8.22□□□□□ -1.09
SHM2YLR058C TIM18Q08749 192 aa8.22□□□□□ -1.09
SHM2YLR058C TY1A-BRQ12217 440 aa8.22□□□□□ -1.09
SHM2YLR058C AYT1Q12226 474 aa8.22□□□□□ -1.09
SHM2YLR058C TY1A-NL2Q12470 440 aa8.22□□□□□ -1.09
SHM2YLR058C TY1A-GR2Q12485 440 aa8.22□□□□□ -1.09
SHM2YLR058C LSM2P38203 95 aaKnown RBP8.21□□□□□ -1.09
SHM2YLR058C YNR071CP53757 342 aa8.21□□□□□ -1.09
SHM2YLR058C SNO1Q03144 224 aa8.21□□□□□ -1.09
SHM2YLR058C IMD2P38697 523 aaKnown RBP8.2□□□□□ -1.1
SHM2YLR058C YDL186WP48568 277 aa8.2□□□□□ -1.1
SHM2YLR058C MRPL23Q12487 163 aaPredicted RBP8.2□□□□□ -1.1
SHM2YLR058C CNB1P25296 175 aa8.2□□□□□ -1.1
SHM2YLR058C PRY2P36110 329 aa8.2□□□□□ -1.1
SHM2YLR058C GLE2P40066 365 aa8.2□□□□□ -1.1
SHM2YLR058C POG1P40473 351 aa8.2□□□□□ -1.1
SHM2YLR058C IMP2P46972 177 aa8.2□□□□□ -1.1
SHM2YLR058C OCA2P53949 197 aa8.2□□□□□ -1.1
SHM2YLR058C TDH1P00360 332 aaKnown RBP8.19□□□□□ -1.1
SHM2YLR058C YER190C-BP0CX94 160 aa8.19□□□□□ -1.1
SHM2YLR058C YEL077W-AP0CX95 160 aa8.19□□□□□ -1.1
SHM2YLR058C YGR296C-BP0CX96 160 aa8.19□□□□□ -1.1
SHM2YLR058C YPL283W-BP0CX97 160 aa8.19□□□□□ -1.1
SHM2YLR058C YPR204C-AP0CX98 160 aa8.19□□□□□ -1.1
SHM2YLR058C YFL068WP0CX99 160 aa8.19□□□□□ -1.1
SHM2YLR058C YLL066W-AP0CY00 160 aa8.19□□□□□ -1.1
SHM2YLR058C YLL067W-AP0CY01 160 aa8.19□□□□□ -1.1
SHM2YLR058C HSP12P22943 109 aaKnown RBP8.19□□□□□ -1.1
SHM2YLR058C YNL194CP40169 301 aa8.19□□□□□ -1.1
SHM2YLR058C POR2P40478 281 aa8.19□□□□□ -1.1
SHM2YLR058C LOA1Q06508 300 aa8.19□□□□□ -1.1
SHM2YLR058C FIT2Q08906 153 aa8.19□□□□□ -1.1
SHM2YLR058C RNA15P25299 296 aaPredicted RBP8.18□□□□□ -1.1
SHM2YLR058C PHS1P40857 217 aa8.18□□□□□ -1.1
SHM2YLR058C LDS2Q08218 356 aa8.18□□□□□ -1.1
SHM2YLR058C LAS17Q12446 633 aa8.18□□□□□ -1.1
SHM2YLR058C DYN1P36022 4092 aa8.17□□□□□ -1.1
SHM2YLR058C HMX1P32339 317 aa8.17□□□□□ -1.1
SHM2YLR058C NCE103P53615 221 aa8.17□□□□□ -1.1
SHM2YLR058C SEC59P20048 519 aa8.16□□□□□ -1.1
SHM2YLR058C TIR2P33890 251 aa8.16□□□□□ -1.1
SHM2YLR058C RPA43P46669 326 aa8.16□□□□□ -1.1
SHM2YLR058C BNS1P50084 137 aa8.16□□□□□ -1.1
SHM2YLR058C MRX11Q03079 207 aa8.16□□□□□ -1.1
SHM2YLR058C PRM3Q08931 133 aa8.16□□□□□ -1.1
SHM2YLR058C RPS22AP0C0W1 130 aaKnown RBP8.15□□□□□ -1.1
SHM2YLR058C COQ3P27680 312 aa8.15□□□□□ -1.1
SHM2YLR058C AFR1P33304 620 aa8.15□□□□□ -1.1
SHM2YLR058C YKL102CP34249 101 aa8.15□□□□□ -1.1
SHM2YLR058C YPI1P43587 155 aa8.15□□□□□ -1.1
SHM2YLR058C YGR035W-AQ45U48 73 aa8.15□□□□□ -1.1
SHM2YLR058C DDI2P0CH63 225 aa8.14□□□□□ -1.11
SHM2YLR058C DDI3P0CH64 225 aa8.14□□□□□ -1.11
SHM2YLR058C LAC1P28496 418 aa8.14□□□□□ -1.11
SHM2YLR058C NNK1P36003 928 aa8.14□□□□□ -1.11
SHM2YLR058C ICS2P38284 255 aa8.14□□□□□ -1.11
SHM2YLR058C YIL077CP40508 320 aa8.14□□□□□ -1.11
SHM2YLR058C YPR013CQ12145 317 aa8.14□□□□□ -1.11
SHM2YLR058C YHR173CP38864 112 aa8.13□□□□□ -1.11
SHM2YLR058C YIL163CP40448 117 aa8.13□□□□□ -1.11
SHM2YLR058C AGE2P40529 298 aa8.13□□□□□ -1.11
SHM2YLR058C TY1A-LR4P0C2I8 440 aaKnown RBP8.12□□□□□ -1.11
SHM2YLR058C TY1A-DR6P0CX70 440 aa8.12□□□□□ -1.11
SHM2YLR058C TY1A-ER1P0CX71 440 aa8.12□□□□□ -1.11
SHM2YLR058C TY1A-LR2P0CX72 440 aa8.12□□□□□ -1.11
SHM2YLR058C TY1A-PLP0CX73 440 aa8.12□□□□□ -1.11
SHM2YLR058C TY1A-JR1P0CX74 440 aa8.12□□□□□ -1.11
SHM2YLR058C TY1A-LR3P0CX75 440 aa8.12□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 27.3 ms