RNA–Protein interactions for RNA: YAL018C

LDS1, Transcript of Protein Involved in spore wall assembly, yeast

Gene LDS1, Length 978 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
LDS1	YAL018C	YGR219W	P53307	113 aa		4.85	□□□□□ -1.63
LDS1	YAL018C	AVO2	Q04749	426 aa		4.85	□□□□□ -1.63
LDS1	YAL018C	CTR3	Q06686	241 aa		4.85	□□□□□ -1.63
LDS1	YAL018C	VMA9	Q3E7B6	73 aa		4.85	□□□□□ -1.63
LDS1	YAL018C	TDH1	P00360	332 aa	Known RBP	4.84	□□□□□ -1.63
LDS1	YAL018C	DFR1	P07807	211 aa	Known RBP RIP-Chip data	4.84	□□□□□ -1.63	not detected
LDS1	YAL018C	PAU1	P0CE88	120 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	PAU14	P0CE89	120 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	PAU6	P0CE90	120 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	PAU18	P0CE91	120 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	PAU8	P0CE92	120 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	PAU11	P0CE93	120 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	SEC59	P20048	519 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	ELO2	P25358	347 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	YCR022C	P25620	114 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	PRY2	P36110	329 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	PAU13	P38725	120 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	YNL194C	P40169	301 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	POG1	P40473	351 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	RTS2	P40962	232 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	VPS55	P47111	140 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	YGR018C	P53211	109 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	SWT21	P53873	357 aa	Predicted RBP	4.84	□□□□□ -1.63
LDS1	YAL018C	ERV25	P54837	211 aa	Known RBP	4.84	□□□□□ -1.63
LDS1	YAL018C	PAU10	Q03050	120 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	YMR007W	Q03675	126 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	YHP1	Q04116	353 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	HOR7	Q05827	59 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	PBP4	Q07362	185 aa	Known RBP	4.84	□□□□□ -1.63
LDS1	YAL018C	PAU20	Q08322	120 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	PAU9	Q3E770	120 aa		4.84	□□□□□ -1.63
LDS1	YAL018C	YMR316C-A	I2HB70	103 aa		4.83	□□□□□ -1.64
LDS1	YAL018C	CDC7	P06243	507 aa		4.83	□□□□□ -1.64
LDS1	YAL018C	HSP12	P22943	109 aa	Known RBP	4.83	□□□□□ -1.64
LDS1	YAL018C	RPL14A	P36105	138 aa	Known RBP	4.83	□□□□□ -1.64
LDS1	YAL018C	ICS2	P38284	255 aa		4.83	□□□□□ -1.64
LDS1	YAL018C	MIC12	P38341	106 aa		4.83	□□□□□ -1.64
LDS1	YAL018C	RPL14B	P38754	138 aa	Known RBP	4.83	□□□□□ -1.64
LDS1	YAL018C	YIL024C	P40543	189 aa		4.83	□□□□□ -1.64
LDS1	YAL018C	TAX4	P47030	604 aa		4.83	□□□□□ -1.64
LDS1	YAL018C	CPD1	P53314	239 aa		4.83	□□□□□ -1.64
LDS1	YAL018C	CAB4	P53332	305 aa		4.83	□□□□□ -1.64
LDS1	YAL018C	YNR071C	P53757	342 aa		4.83	□□□□□ -1.64
LDS1	YAL018C	RXT3	Q07458	294 aa		4.83	□□□□□ -1.64
LDS1	YAL018C	POP5	P28005	173 aa		4.82	□□□□□ -1.64
LDS1	YAL018C	YPS1	P32329	569 aa		4.82	□□□□□ -1.64
LDS1	YAL018C	SFT2	P38166	215 aa		4.82	□□□□□ -1.64
LDS1	YAL018C	PET100	P38958	111 aa		4.82	□□□□□ -1.64
LDS1	YAL018C	POR2	P40478	281 aa		4.82	□□□□□ -1.64
LDS1	YAL018C	HST4	P53688	370 aa		4.82	□□□□□ -1.64
LDS1	YAL018C	DUG3	P53871	357 aa		4.82	□□□□□ -1.64
LDS1	YAL018C	MOT3	P54785	490 aa	Known RBP	4.82	□□□□□ -1.64
LDS1	YAL018C	VTS1	Q08831	523 aa	Known RBP RIP-Chip data	4.82	□□□□□ -1.64	not detected
LDS1	YAL018C	PRM3	Q08931	133 aa		4.82	□□□□□ -1.64
LDS1	YAL018C	Q0142	Q9ZZW4	58 aa		4.82	□□□□□ -1.64
LDS1	YAL018C	COX2	P00410	251 aa		4.81	□□□□□ -1.64
LDS1	YAL018C	CYC3	P06182	269 aa		4.81	□□□□□ -1.64
LDS1	YAL018C	PET494	P07390	489 aa	Predicted RBP	4.81	□□□□□ -1.64
LDS1	YAL018C	RPS22A	P0C0W1	130 aa	Known RBP	4.81	□□□□□ -1.64
LDS1	YAL018C	HMX1	P32339	317 aa		4.81	□□□□□ -1.64
LDS1	YAL018C	YCR041W	P37265	110 aa		4.81	□□□□□ -1.64
LDS1	YAL018C	CYB5	P40312	120 aa		4.81	□□□□□ -1.64
LDS1	YAL018C	PHS1	P40857	217 aa		4.81	□□□□□ -1.64
LDS1	YAL018C	LOC1	P43586	204 aa	Predicted RBP	4.81	□□□□□ -1.64
LDS1	YAL018C	ATG27	P46989	271 aa		4.81	□□□□□ -1.64
LDS1	YAL018C	YDL186W	P48568	277 aa		4.81	□□□□□ -1.64
LDS1	YAL018C	TOS8	P53147	276 aa		4.81	□□□□□ -1.64
LDS1	YAL018C	MRX11	Q03079	207 aa		4.81	□□□□□ -1.64
LDS1	YAL018C	TIM18	Q08749	192 aa		4.81	□□□□□ -1.64
LDS1	YAL018C	MRPL23	Q12487	163 aa	Predicted RBP	4.81	□□□□□ -1.64
LDS1	YAL018C	PCC1	Q3E833	88 aa		4.81	□□□□□ -1.64
LDS1	YAL018C	CNB1	P25296	175 aa		4.8	□□□□□ -1.64
LDS1	YAL018C	RPS2	P25443	254 aa	Known RBP	4.8	□□□□□ -1.64
LDS1	YAL018C	AFR1	P33304	620 aa		4.8	□□□□□ -1.64
LDS1	YAL018C	YNK1	P36010	153 aa	Known RBP	4.8	□□□□□ -1.64
LDS1	YAL018C	WWM1	P43582	211 aa	Known RBP	4.8	□□□□□ -1.64
LDS1	YAL018C	YPI1	P43587	155 aa		4.8	□□□□□ -1.64
LDS1	YAL018C	DSK2	P48510	373 aa		4.8	□□□□□ -1.64
LDS1	YAL018C	YML122C	Q03207	126 aa		4.8	□□□□□ -1.64
LDS1	YAL018C	LDS2	Q08218	356 aa		4.8	□□□□□ -1.64
LDS1	YAL018C	IRC23	Q08416	157 aa		4.8	□□□□□ -1.64
LDS1	YAL018C	MSA1	Q08471	629 aa		4.8	□□□□□ -1.64
LDS1	YAL018C	ERV2	Q12284	196 aa		4.8	□□□□□ -1.64
LDS1	YAL018C	ADH3	P07246	375 aa	Known RBP	4.79	□□□□□ -1.64
LDS1	YAL018C	DDI2	P0CH63	225 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	DDI3	P0CH64	225 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	YHR213W	P0CI67	198 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	YER190C-B	P0CX94	160 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	YEL077W-A	P0CX95	160 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	YGR296C-B	P0CX96	160 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	YPL283W-B	P0CX97	160 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	YPR204C-A	P0CX98	160 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	YFL068W	P0CX99	160 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	YLL066W-A	P0CY00	160 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	YLL067W-A	P0CY01	160 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	RNA15	P25299	296 aa	Predicted RBP	4.79	□□□□□ -1.64
LDS1	YAL018C	DUT1	P33317	147 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	YKL102C	P34249	101 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	MRPL4	P36517	319 aa		4.79	□□□□□ -1.64
LDS1	YAL018C	TRS20	P38334	175 aa		4.79	□□□□□ -1.64

Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms