RNA–Protein interactions for RNA: ENST00000642137.1

LINC00339-213, long intergenic non-protein coding RNA 339, humanhuman

BASIC

Gene LINC00339, Length 222 nt, Biotype transcribed processed pseudogene, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-213ENST00000642137 MTUS1Q9ULD2 1270 aa13.14□□□□□ -0.31
LINC00339-213ENST00000642137 KIAA1257Q9ULG3 409 aa13.14□□□□□ -0.31
LINC00339-213ENST00000642137 TMEM265A0A087WTH1 108 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 OR6C75A6NL08 312 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 AKR1B15C9JRZ8 316 aaPredicted RBP13.13□□□□□ -0.31
LINC00339-213ENST00000642137 F8VZ95 297 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 GRM6O15303 877 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 CXCL14O95715 111 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 URODP06132 367 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 PAEPP09466 180 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 PDGFRBP09619 1106 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 CCDC172P0C7W6 258 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 PTPN1P18031 435 aaKnown RBP13.13□□□□□ -0.31
LINC00339-213ENST00000642137 CLCN1P35523 988 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 KRT9P35527 623 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 USP8P40818 1118 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 FXR1P51114 621 aaKnown RBP eCLIP13.13□□□□□ -0.31
LINC00339-213ENST00000642137 ZNF132P52740 706 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 ERVFC1P60507 584 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 CTXN3Q4LDR2 81 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 ZNF280DQ6N043 979 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 TMC7Q7Z402 723 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 SLC4A11Q8NBS3 891 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 OR8K1Q8NGG5 319 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 B3GALT6Q96L58 329 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 RTP3Q9BQQ7 232 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 ELOVL4Q9GZR5 314 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 ZNF576Q9H609 170 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 CERS4Q9HA82 394 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 RXFP1Q9HBX9 757 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.13□□□□□ -0.31
LINC00339-213ENST00000642137 MTRRQ9UBK8 725 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 NME7Q9Y5B8 376 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 IRAK3Q9Y616 596 aa13.13□□□□□ -0.31
LINC00339-213ENST00000642137 TSC2P49815 1807 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 LRRC53A6NM62 1247 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 GOLGA6L6A8MZA4 724 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 FSCN2O14926 492 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 CYP26A1O43174 497 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 VDRP11473 427 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 KRT5P13647 590 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 FERP16591 822 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 DNAJB1P25685 340 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 HNRNPH3P31942 346 aaKnown RBP13.12□□□□□ -0.31
LINC00339-213ENST00000642137 CREMQ03060 361 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 PTK2Q05397 1052 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 CAMK1Q14012 370 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 SMC1AQ14683 1233 aaKnown RBP13.12□□□□□ -0.31
LINC00339-213ENST00000642137 PSMD5Q16401 504 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 TSR1Q2NL82 804 aaKnown RBP13.12□□□□□ -0.31
LINC00339-213ENST00000642137 ZNF394Q53GI3 561 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 SFMBT2Q5VUG0 894 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 FAM171BQ6P995 826 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 PRSS55Q6UWB4 352 aaPredicted RBP13.12□□□□□ -0.31
LINC00339-213ENST00000642137 IRF2BP2Q7Z5L9 587 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 CNGA4Q8IV77 575 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 DCP1BQ8IZD4 617 aaKnown RBP13.12□□□□□ -0.31
LINC00339-213ENST00000642137 RBBP8NLQ8NC74 664 aaPredicted RBP13.12□□□□□ -0.31
LINC00339-213ENST00000642137 ARNTL2Q8WYA1 636 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 HEXIM2Q96MH2 286 aaKnown RBP13.12□□□□□ -0.31
LINC00339-213ENST00000642137 TWNKQ96RR1 684 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 SYT15Q9BQS2 421 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 CLSTN3Q9BQT9 956 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 ZCWPW1Q9H0M4 648 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 TLR9Q9NR96 1032 aa13.12□□□□□ -0.31
LINC00339-213ENST00000642137 MFAP3LO75121 409 aa13.11□□□□□ -0.31
LINC00339-213ENST00000642137 GFPT2O94808 682 aa13.11□□□□□ -0.31
LINC00339-213ENST00000642137 ACAT1P24752 427 aaKnown RBP13.11□□□□□ -0.31
LINC00339-213ENST00000642137 ADKP55263 362 aaKnown RBP13.11□□□□□ -0.31
LINC00339-213ENST00000642137 TSPY1Q01534 308 aa13.11□□□□□ -0.31
LINC00339-213ENST00000642137 SMARCB1Q12824 385 aa13.11□□□□□ -0.31
LINC00339-213ENST00000642137 PTPN14Q15678 1187 aa13.11□□□□□ -0.31
LINC00339-213ENST00000642137 MAPRE1Q15691 268 aaKnown RBP13.11□□□□□ -0.31
LINC00339-213ENST00000642137 INTS6LQ5JSJ4 861 aaKnown RBP13.11□□□□□ -0.31
LINC00339-213ENST00000642137 SLC8B1Q6J4K2 584 aa13.11□□□□□ -0.31
LINC00339-213ENST00000642137 ACOT1Q86TX2 421 aa13.11□□□□□ -0.31
LINC00339-213ENST00000642137 MRPL43Q8N983 215 aaKnown RBP13.11□□□□□ -0.31
LINC00339-213ENST00000642137 SPC24Q8NBT2 197 aa13.11□□□□□ -0.31
LINC00339-213ENST00000642137 B3GALNT2Q8NCR0 500 aa13.11□□□□□ -0.31
LINC00339-213ENST00000642137 MICAL1Q8TDZ2 1067 aa13.11□□□□□ -0.31
LINC00339-213ENST00000642137 PDLIM2Q96JY6 352 aa13.11□□□□□ -0.31
LINC00339-213ENST00000642137 DNAJC7Q99615 494 aa13.11□□□□□ -0.31
LINC00339-213ENST00000642137 TCF25Q9BQ70 676 aa13.11□□□□□ -0.31
LINC00339-213ENST00000642137 DPEP3Q9H4B8 488 aa13.11□□□□□ -0.31
LINC00339-213ENST00000642137 HMGXB4Q9UGU5 601 aa13.11□□□□□ -0.31
LINC00339-213ENST00000642137 BZW2Q9Y6E2 419 aaKnown RBP13.11□□□□□ -0.31
LINC00339-213ENST00000642137 MYBPHLA2RUH7 354 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 C2CD2LO14523 706 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 HCRTO43612 131 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 LPXNO60711 386 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 ATP2C2O75185 946 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 C1RP00736 705 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 PNMA6AP0CW24 399 aaPredicted RBP13.1□□□□□ -0.31
LINC00339-213ENST00000642137 OR1D2P34982 312 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 PRKCIP41743 596 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 GPR17Q13304 367 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 STILQ15468 1287 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 CNGA2Q16280 664 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 ASIC2Q16515 512 aa13.1□□□□□ -0.31
LINC00339-213ENST00000642137 ARHGAP17Q68EM7 881 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms