RNA–Protein interactions for RNA: ENST00000641720.1

PHGDH-225, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 548 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-225ENST00000641720 ROR1Q01973 937 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 KCNA1Q09470 495 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 CCINQ13939 588 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 MRPL58Q14197 206 aaKnown RBP8.05□□□□□ -1.12
PHGDH-225ENST00000641720 FAM187BQ17R55 369 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 KMT5BQ4FZB7 885 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 FAM26FQ5R3K3 315 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 STPG1Q5TH74 334 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 LIN9Q5TKA1 542 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 SLC8B1Q6J4K2 584 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 PDZRN4Q6ZMN7 1036 aaPredicted RBP8.05□□□□□ -1.12
PHGDH-225ENST00000641720 PRR23BQ6ZRT6 265 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 HAUS6Q7Z4H7 955 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 WDR5BQ86VZ2 330 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 LONP2Q86WA8 852 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 CCDC65Q8IXS2 484 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 KIAA0895Q8NCT3 520 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 FAM3CQ92520 227 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 PPP1R10Q96QC0 940 aaKnown RBP8.05□□□□□ -1.12
PHGDH-225ENST00000641720 NTPCRQ9BSD7 190 aaKnown RBP8.05□□□□□ -1.12
PHGDH-225ENST00000641720 TARS2Q9BW92 718 aaKnown RBP8.05□□□□□ -1.12
PHGDH-225ENST00000641720 APOL6Q9BWW8 343 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 STRA6Q9BX79 667 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 LRRC27Q9C0I9 530 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 CLSTN2Q9H4D0 955 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 PDZD7Q9H5P4 517 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 MRPL44Q9H9J2 332 aaKnown RBP8.05□□□□□ -1.12
PHGDH-225ENST00000641720 EXOC1Q9NV70 894 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 PRMT7Q9NVM4 692 aaPredicted RBP8.05□□□□□ -1.12
PHGDH-225ENST00000641720 SEL1LQ9UBV2 794 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 MRPS23Q9Y3D9 190 aaKnown RBP8.05□□□□□ -1.12
PHGDH-225ENST00000641720 BACE2Q9Y5Z0 518 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 PIAS3Q9Y6X2 628 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 MGAQ8IWI9 3026 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 GOLGA4Q13439 2230 aaKnown RBP8.05□□□□□ -1.12
PHGDH-225ENST00000641720 CABIN1Q9Y6J0 2220 aa8.05□□□□□ -1.12
PHGDH-225ENST00000641720 PVALEFA0A1B0GWK0 134 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 GOLGA6L22H0YM25 854 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 TAF4O00268 1085 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 ACKR2O00590 384 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 MAN2B1O00754 1011 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 ABLIM1O14639 778 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 RECQL4O94761 1208 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 GCNT3O95395 438 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 RPN1P04843 607 aaKnown RBP8.04□□□□□ -1.12
PHGDH-225ENST00000641720 MYL1P05976 194 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 CXCL12P48061 93 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 SOX9P48436 509 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 SMTNP53814 917 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 GTF2BQ00403 316 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 SOX4Q06945 474 aaPredicted RBP8.04□□□□□ -1.12
PHGDH-225ENST00000641720 FCHO2Q0JRZ9 810 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 STK4Q13043 487 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 PRPF4BQ13523 1007 aaKnown RBP8.04□□□□□ -1.12
PHGDH-225ENST00000641720 CAMK4Q16566 473 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 MAPK6Q16659 721 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 SLC39A4Q6P5W5 647 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 SLC27A1Q6PCB7 646 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 EPM2AIP1Q7L775 607 aaPredicted RBP8.04□□□□□ -1.12
PHGDH-225ENST00000641720 ZNF720Q7Z2F6 126 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 TMC8Q8IU68 726 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 SMYD4Q8IYR2 804 aaPredicted RBP8.04□□□□□ -1.12
PHGDH-225ENST00000641720 HS6ST3Q8IZP7 471 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 SPATA20Q8TB22 786 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 SCFD1Q8WVM8 642 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 DDX1Q92499 740 aaKnown RBP8.04□□□□□ -1.12
PHGDH-225ENST00000641720 KCNN1Q92952 543 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 PRIMPOLQ96LW4 560 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 MRPL4Q9BYD3 311 aaKnown RBP8.04□□□□□ -1.12
PHGDH-225ENST00000641720 HAPLN2Q9GZV7 340 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 ST6GALNAC4Q9H4F1 302 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 SMOC1Q9H4F8 434 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 TMEM134Q9H6X4 195 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 SLC39A2Q9NP94 309 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 CEP72Q9P209 647 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 TBX20Q9UMR3 447 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 MRPS17Q9Y2R5 130 aaKnown RBP8.04□□□□□ -1.12
PHGDH-225ENST00000641720 GDAQ9Y2T3 454 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 PCDHA5Q9Y5H7 936 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 CDY1Q9Y6F8 540 aa8.04□□□□□ -1.12
PHGDH-225ENST00000641720 MYO18BQ8IUG5 2567 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 TMEM131Q92545 1883 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 MYBPHLA2RUH7 354 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 SRRM3A6NNA2 597 aaPredicted RBP8.03□□□□□ -1.12
PHGDH-225ENST00000641720 ANKRD63C9JTQ0 380 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 I3L4J1 428 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 K7ERI5 159 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 TADA2AO75478 443 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 PRPF6O94906 941 aaKnown RBP8.03□□□□□ -1.12
PHGDH-225ENST00000641720 RHOBTB3O94955 611 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 PIGRP01833 764 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 HARSP12081 509 aaKnown RBP8.03□□□□□ -1.12
PHGDH-225ENST00000641720 PSMC3P17980 439 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 SPINK2P20155 84 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 PROZP22891 400 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 CCNE1P24864 410 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 GDI1P31150 447 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 VIPR2P41587 438 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 BRCC3P46736 316 aa8.03□□□□□ -1.12
PHGDH-225ENST00000641720 UPP1Q16831 310 aa8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms