RNA–Protein interactions for RNA: ENST00000639856.1

TRIM3-215, Transcript of tripartite motif containing 3, humanhuman

TSL 5 BASIC

Gene TRIM3, Length 2,137 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-215ENST00000639856 SIX4Q9UIU6 781 aa16.01■□□□□ 0.15
TRIM3-215ENST00000639856 SCINQ9Y6U3 715 aa16.01■□□□□ 0.15
TRIM3-215ENST00000639856 ALDH1A1P00352 501 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 KRT19P08727 400 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 CD58P19256 250 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 KCNJ1P48048 391 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 NOGQ13253 232 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 PDCLQ13371 301 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 SGSM1Q2NKQ1 1148 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 ZNF699Q32M78 642 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 MFSD14CQ5VZR4 134 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 TTC19Q6DKK2 380 aaPredicted RBP16■□□□□ 0.15
TRIM3-215ENST00000639856 CATSPER4Q7RTX7 472 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 GADD45GIP1Q8TAE8 222 aaPredicted RBP16■□□□□ 0.15
TRIM3-215ENST00000639856 DDX27Q96GQ7 796 aaKnown RBP16■□□□□ 0.15
TRIM3-215ENST00000639856 CXCL16Q9H2A7 254 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 PTPN22Q9Y2R2 807 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 NPTXRO95502 500 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 ECEL1O95672 775 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 DARSP14868 501 aaKnown RBP16■□□□□ 0.15
TRIM3-215ENST00000639856 PMS2P54278 862 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 SGO2Q562F6 1265 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 GNASQ5JWF2 1037 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 AGBL2Q5U5Z8 902 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 MMS22LQ6ZRQ5 1243 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 CAPNS2Q96L46 248 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 EIF2AQ9BY44 585 aaKnown RBP16■□□□□ 0.15
TRIM3-215ENST00000639856 NIF3L1Q9GZT8 377 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 PABPC3Q9H361 631 aaKnown RBP16■□□□□ 0.15
TRIM3-215ENST00000639856 MTRF1LQ9UGC7 380 aaKnown RBP16■□□□□ 0.15
TRIM3-215ENST00000639856 POLIQ9UNA4 740 aa16■□□□□ 0.15
TRIM3-215ENST00000639856 BRCA2P51587 3418 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 C17orf102A2RUQ5 167 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 PSTPIP1O43586 416 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 WEE2P0C1S8 567 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 MMP8P22894 467 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 ASPAP45381 313 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 LLGL1Q15334 1064 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 CXCL17Q6UXB2 119 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 ARFGAP2Q8N6H7 521 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 C7orf31Q8N865 590 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 BCAS4Q8TDM0 211 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 ADPGKQ9BRR6 497 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 KATNAL1Q9BW62 490 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 FAM129AQ9BZQ8 928 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 EPB41L4BQ9H329 900 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 PARVAQ9NVD7 372 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 SCN10AQ9Y5Y9 1956 aa15.99■□□□□ 0.15
TRIM3-215ENST00000639856 TOMM70O94826 608 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 ITGB3P05106 788 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 NUDT17P0C025 328 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 ELNP15502 786 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 GJA9P57773 515 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 CACNB2Q08289 660 aaPredicted RBP15.98■□□□□ 0.15
TRIM3-215ENST00000639856 RHOT1Q8IXI2 618 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 CXorf38Q8TB03 319 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 C1orf54Q8WWF1 131 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 ART4Q93070 314 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 ACAP3Q96P50 834 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 CISHQ9NSE2 258 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 NXF1Q9UBU9 619 aaKnown RBP15.98■□□□□ 0.15
TRIM3-215ENST00000639856 RSPH14Q9UHP6 348 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 HES2Q9Y543 173 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 TLR3O15455 904 aaKnown RBP15.98■□□□□ 0.15
TRIM3-215ENST00000639856 HOXC8P31273 242 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 RAP1GAPP47736 663 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 IFFO1Q0D2I5 559 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 SNX17Q15036 470 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 PPP1R7Q15435 360 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 KRT71Q3SY84 523 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 ZNF394Q53GI3 561 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 DAB2IPQ5VWQ8 1189 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 FEZF2Q8TBJ5 459 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 RNF186Q9NXI6 227 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 CASP8AP2Q9UKL3 1982 aa15.98■□□□□ 0.15
TRIM3-215ENST00000639856 LSM8O95777 96 aaKnown RBP15.97■□□□□ 0.15
TRIM3-215ENST00000639856 EIF4BP23588 611 aaKnown RBP15.97■□□□□ 0.15
TRIM3-215ENST00000639856 CCND3P30281 292 aaPredicted RBP15.97■□□□□ 0.15
TRIM3-215ENST00000639856 HPDP32754 393 aaPredicted RBP15.97■□□□□ 0.15
TRIM3-215ENST00000639856 LSP1P33241 339 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 MAN1A1P33908 653 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 MDH1P40925 334 aaKnown RBP15.97■□□□□ 0.15
TRIM3-215ENST00000639856 GUCY1A3Q02108 690 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 TMEM132DQ14C87 1099 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 SMYD5Q6GMV2 418 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 HERPUD2Q9BSE4 406 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 ASB7Q9H672 318 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 CHST7Q9NS84 486 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 SNTG2Q9NY99 539 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 BCCIPQ9P287 314 aaKnown RBP eCLIP15.97■□□□□ 0.15
TRIM3-215ENST00000639856 O00370 1275 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 MYCNP04198 464 aaPredicted RBP15.97■□□□□ 0.15
TRIM3-215ENST00000639856 GRM5P41594 1212 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 TAS2R40P59535 323 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 CDC42EP1Q00587 391 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 KRT17Q04695 432 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 DEFB115Q30KQ5 88 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 DENND2CQ68D51 928 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 KATNAL2Q8IYT4 538 aa15.97■□□□□ 0.15
TRIM3-215ENST00000639856 RNF25Q96BH1 459 aaPredicted RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 92.5 ms