RNA–Protein interactions for RNA: ENST00000638794.1

SMN2-216, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMN2, Length 846 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-216ENST00000638794 EPC1Q9H2F5 836 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 IL21Q9HBE4 155 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 OLFML3Q9NRN5 406 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 NCDNQ9UBB6 729 aa18.19■□□□□ 0.5
SMN2-216ENST00000638794 SMG5Q9UPR3 1016 aaKnown RBP18.19■□□□□ 0.5
SMN2-216ENST00000638794 A0A087X0B3 334 aa18.18■□□□□ 0.5
SMN2-216ENST00000638794 FRMD3A2A2Y4 597 aa18.18■□□□□ 0.5
SMN2-216ENST00000638794 TULP1O00294 542 aaPredicted RBP18.18■□□□□ 0.5
SMN2-216ENST00000638794 DPYSL4O14531 572 aa18.18■□□□□ 0.5
SMN2-216ENST00000638794 IDEP14735 1019 aa18.18■□□□□ 0.5
SMN2-216ENST00000638794 POLR2BP30876 1174 aaKnown RBP18.18■□□□□ 0.5
SMN2-216ENST00000638794 STAT6P42226 847 aa18.18■□□□□ 0.5
SMN2-216ENST00000638794 KPNA1P52294 538 aaPredicted RBP18.18■□□□□ 0.5
SMN2-216ENST00000638794 TFAMQ00059 246 aaKnown RBP18.18■□□□□ 0.5
SMN2-216ENST00000638794 BRSK2Q8IWQ3 736 aa18.18■□□□□ 0.5
SMN2-216ENST00000638794 SPPL2BQ8TCT7 592 aa18.18■□□□□ 0.5
SMN2-216ENST00000638794 GIPC2Q8TF65 315 aa18.18■□□□□ 0.5
SMN2-216ENST00000638794 USP28Q96RU2 1077 aa18.18■□□□□ 0.5
SMN2-216ENST00000638794 PANK2Q9BZ23 570 aa18.18■□□□□ 0.5
SMN2-216ENST00000638794 TASP1Q9H6P5 420 aa18.18■□□□□ 0.5
SMN2-216ENST00000638794 OBP2AQ9NY56 170 aa18.18■□□□□ 0.5
SMN2-216ENST00000638794 ABI2Q9NYB9 513 aaPredicted RBP18.18■□□□□ 0.5
SMN2-216ENST00000638794 PCDHB13Q9Y5F0 798 aa18.18■□□□□ 0.5
SMN2-216ENST00000638794 ZNF638Q14966 1978 aaKnown RBP18.18■□□□□ 0.5
SMN2-216ENST00000638794 SPECC1L-ADORA2AF8WAN1 911 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 ITGB3P05106 788 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 HAPLN1P10915 354 aaPredicted RBP18.17■□□□□ 0.5
SMN2-216ENST00000638794 CDC25CP30307 473 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 PNPLA4P41247 253 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 CCR3P51677 355 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 SMARCB1Q12824 385 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 GAS6Q14393 721 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 TAF12Q16514 161 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 ARHGAP29Q52LW3 1261 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 WDR44Q5JSH3 913 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 C1orf228Q6PIY5 440 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 TXNDC11Q6PKC3 985 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 DCP1BQ8IZD4 617 aaKnown RBP18.17■□□□□ 0.5
SMN2-216ENST00000638794 C1orf127Q8N9H9 656 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 TTC8Q8TAM2 541 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 FAM84AQ96KN4 292 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 GCNAQ96QF7 691 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 C8orf33Q9H7E9 229 aaPredicted RBP18.17■□□□□ 0.5
SMN2-216ENST00000638794 TMLHEQ9NVH6 421 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 RBAKQ9NYW8 714 aaPredicted RBP18.17■□□□□ 0.5
SMN2-216ENST00000638794 GTSE1Q9NYZ3 720 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 MTMR6Q9Y217 621 aa18.17■□□□□ 0.5
SMN2-216ENST00000638794 MORC2Q9Y6X9 1032 aaPredicted RBP18.17■□□□□ 0.5
SMN2-216ENST00000638794 MYBPHLA2RUH7 354 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 GOLGA8IPA6NC78 632 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 GOLGA8JA6NMD2 632 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 GARTP22102 1010 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 WEE1P30291 646 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 CTHP32929 405 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 SATB1Q01826 763 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 LRRC32Q14392 662 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 PPP2R5DQ14738 602 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 SLC39A14Q15043 492 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 SCARA3Q6AZY7 606 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 SYCP3Q8IZU3 236 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 PDCL2Q8N4E4 241 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 BPIFB1Q8TDL5 484 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 INTS4Q96HW7 963 aaKnown RBP18.16■□□□□ 0.5
SMN2-216ENST00000638794 CBWD1Q9BRT8 395 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 SLC46A2Q9BY10 475 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 SMG9Q9H0W8 520 aaKnown RBP18.16■□□□□ 0.5
SMN2-216ENST00000638794 RBM12Q9NTZ6 932 aaKnown RBP18.16■□□□□ 0.5
SMN2-216ENST00000638794 L1RE1Q9UN81 338 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 AGAP1Q9UPQ3 857 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 PCDHB5Q9Y5E4 795 aa18.16■□□□□ 0.5
SMN2-216ENST00000638794 LDHAP00338 332 aaKnown RBP18.15■□□□□ 0.5
SMN2-216ENST00000638794 NRLP54845 237 aa18.15■□□□□ 0.5
SMN2-216ENST00000638794 TSPY1Q01534 308 aa18.15■□□□□ 0.5
SMN2-216ENST00000638794 TNK2Q07912 1038 aa18.15■□□□□ 0.5
SMN2-216ENST00000638794 ALCAMQ13740 583 aa18.15■□□□□ 0.5
SMN2-216ENST00000638794 TMEM150AQ86TG1 271 aa18.15■□□□□ 0.5
SMN2-216ENST00000638794 RALGPS2Q86X27 583 aaPredicted RBP18.15■□□□□ 0.5
SMN2-216ENST00000638794 PDILTQ8N807 584 aa18.15■□□□□ 0.5
SMN2-216ENST00000638794 CXorf38Q8TB03 319 aa18.15■□□□□ 0.5
SMN2-216ENST00000638794 NOC3LQ8WTT2 800 aaKnown RBP18.15■□□□□ 0.5
SMN2-216ENST00000638794 FOXD4L1Q9NU39 408 aa18.15■□□□□ 0.5
SMN2-216ENST00000638794 PANK4Q9NVE7 773 aa18.15■□□□□ 0.5
SMN2-216ENST00000638794 EXTL3O43909 919 aa18.14■□□□□ 0.49
SMN2-216ENST00000638794 PRPF6O94906 941 aaKnown RBP18.14■□□□□ 0.49
SMN2-216ENST00000638794 HMGA1P17096 107 aaKnown RBP18.14■□□□□ 0.49
SMN2-216ENST00000638794 CXCL12P48061 93 aa18.14■□□□□ 0.49
SMN2-216ENST00000638794 GPR15P49685 360 aa18.14■□□□□ 0.49
SMN2-216ENST00000638794 PLCB2Q00722 1185 aa18.14■□□□□ 0.49
SMN2-216ENST00000638794 PUM1Q14671 1186 aaKnown RBP eCLIP18.14■□□□□ 0.49
SMN2-216ENST00000638794 NFE2Q16621 373 aaPredicted RBP18.14■□□□□ 0.49
SMN2-216ENST00000638794 Q6ZS52 159 aa18.14■□□□□ 0.49
SMN2-216ENST00000638794 DGLUCYQ7Z3D6 616 aa18.14■□□□□ 0.49
SMN2-216ENST00000638794 CMTM8Q8IZV2 173 aa18.14■□□□□ 0.49
SMN2-216ENST00000638794 SPEM1Q8N4L4 309 aa18.14■□□□□ 0.49
SMN2-216ENST00000638794 LRRC52Q8N7C0 313 aa18.14■□□□□ 0.49
SMN2-216ENST00000638794 STKLD1Q8NE28 680 aa18.14■□□□□ 0.49
SMN2-216ENST00000638794 CACTINQ8WUQ7 758 aaKnown RBP18.14■□□□□ 0.49
SMN2-216ENST00000638794 SECISBP2LQ93073 1101 aaKnown RBP18.14■□□□□ 0.49
SMN2-216ENST00000638794 PI4K2AQ9BTU6 479 aa18.14■□□□□ 0.49
SMN2-216ENST00000638794 MTMR12Q9C0I1 747 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms