RNA–Protein interactions for RNA: ENST00000636194.1

SCN1A-212, Transcript of sodium voltage-gated channel alpha subunit 1, humanhuman

TSL 5

Gene SCN1A, Length 8,508 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1A-212ENST00000636194 ZBED6P86452 979 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 POU4F1Q01851 419 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 LRRC63Q05C16 580 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 MTA1Q13330 715 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 IL18R1Q13478 541 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 ATP13A5Q4VNC0 1218 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 C1orf189Q5VU69 101 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 LINC00523Q86TU6 105 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 SEPT1Q8WYJ6 367 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 CCDC126Q96EE4 140 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 B3GALT6Q96L58 329 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 SAYSD1Q9NPB0 183 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 KLHL1Q9NR64 748 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 ARHGEF38Q9NXL2 777 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 PADI4Q9UM07 663 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 SCAF8Q9UPN6 1271 aaKnown RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 ASCC3Q8N3C0 2202 aaKnown RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 VSTM5A8MXK1 200 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 COPAP53621 1224 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 AP3M2P53677 418 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 ILF2Q12905 390 aaKnown RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 CDC16Q13042 620 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 NME3Q13232 169 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 MAN2A1Q16706 1144 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 KBTBD12Q3ZCT8 623 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 ZNF512Q96ME7 567 aaPredicted RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 KCNK16Q96T55 309 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 FAM49AQ9H0Q0 323 aaPredicted RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 RANBP17Q9H2T7 1088 aaKnown RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 THG1LQ9NWX6 298 aaKnown RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 IP6K2Q9UHH9 426 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 TELO2Q9Y4R8 837 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 ARHGEF10O15013 1369 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 ABCC1P33527 1531 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 SLC2A3P11169 496 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 RFX3P48380 749 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 DDR2Q16832 855 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 CKAP2Q8WWK9 683 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 RIT1Q92963 219 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 THUMPD2Q9BTF0 503 aaKnown RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 MOV10L1Q9BXT6 1211 aaKnown RBP6.25□□□□□ -1.41
SCN1A-212ENST00000636194 KANSL2Q9H9L4 492 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 CAB39LQ9H9S4 337 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 DKK3Q9UBP4 350 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 FBXL21Q9UKT6 434 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 FANCAO15360 1455 aa6.25□□□□□ -1.41
SCN1A-212ENST00000636194 C2orf81A6NN90 581 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 FAM25AB3EWG3 89 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 FAM25CB3EWG5 89 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 FAM25GB3EWG6 89 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 TIMM44O43615 452 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 LRG1P02750 347 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 MYL2P10916 166 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 MYL4P12829 197 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 ACADSP16219 412 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 POLR2EP19388 210 aaKnown RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 PLA2G4AP47712 749 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 COPZ1P61923 177 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 USF2Q15853 346 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 DDI2Q5TDH0 399 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 HSDL2Q6YN16 418 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 ENOSF1Q7L5Y1 443 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 PLBD2Q8NHP8 589 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 NEK7Q8TDX7 302 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 FATE1Q969F0 183 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 FANCFQ9NPI8 374 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 STK39Q9UEW8 545 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 MYCP01106 439 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 CYP17A1P05093 508 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 NOL9Q5SY16 702 aaKnown RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 FAM160B2Q86V87 743 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 ZNF280BQ86YH2 543 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 PNMA1Q8ND90 353 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 SLITRK1Q96PX8 696 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 BLZF1Q9H2G9 400 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 EPB41L4BQ9H329 900 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 VTA1Q9NP79 307 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 HOXC10Q9NYD6 342 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 DNAJC12Q9UKB3 198 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 EIF3LQ9Y262 564 aaKnown RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 MGAT4DA6NG13 374 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 CHURC1-FNTBB4DL54 471 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 H0YJX3 145 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 IGSF3O75054 1194 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 BPNT1O95861 308 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 POMCP01189 267 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 SPARCP09486 303 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 S100A2P29034 98 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 KCNB1Q14721 858 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 ALKBH2Q6NS38 261 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 SCARA5Q6ZMJ2 495 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 PLEKHM2Q8IWE5 1019 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 TTC29Q8NA56 475 aaPredicted RBP6.24□□□□□ -1.41
SCN1A-212ENST00000636194 CLHC1Q8NHS4 586 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 SLC7A14Q8TBB6 771 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 CNDP1Q96KN2 507 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 AIFM2Q9BRQ8 373 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 MANSC1Q9H8J5 431 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 PDE11AQ9HCR9 933 aa6.24□□□□□ -1.41
SCN1A-212ENST00000636194 NPHS2Q9NP85 383 aa6.24□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms