RNA–Protein interactions for RNA: ENST00000634712.2

LINC00339-207, long intergenic non-protein coding RNA 339, humanhuman

TSL 5

Gene LINC00339, Length 1,388 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00339-207ENST00000634712 LRRTM3Q86VH5 581 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 TMC2Q8TDI7 906 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 RSAD2Q8WXG1 361 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 MCRS1Q96EZ8 462 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 TSG101Q99816 390 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 CRISPLD1Q9H336 500 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 SNX25Q9H3E2 840 aa16.83■□□□□ 0.28
LINC00339-207ENST00000634712 ABI2Q9NYB9 513 aaPredicted RBP16.83■□□□□ 0.28
LINC00339-207ENST00000634712 MAPK13O15264 365 aa16.82■□□□□ 0.28
LINC00339-207ENST00000634712 COL9A1P20849 921 aa16.82■□□□□ 0.28
LINC00339-207ENST00000634712 ACAT1P24752 427 aaKnown RBP16.82■□□□□ 0.28
LINC00339-207ENST00000634712 PRCPP42785 496 aa16.82■□□□□ 0.28
LINC00339-207ENST00000634712 VAMP7P51809 220 aa16.82■□□□□ 0.28
LINC00339-207ENST00000634712 MYL6P60660 151 aa16.82■□□□□ 0.28
LINC00339-207ENST00000634712 INTS8Q75QN2 995 aaKnown RBP16.82■□□□□ 0.28
LINC00339-207ENST00000634712 FAM186BQ8IYM0 893 aa16.82■□□□□ 0.28
LINC00339-207ENST00000634712 HS6ST3Q8IZP7 471 aa16.82■□□□□ 0.28
LINC00339-207ENST00000634712 PLEKHO2Q8TD55 490 aa16.82■□□□□ 0.28
LINC00339-207ENST00000634712 GDE1Q9NZC3 331 aa16.82■□□□□ 0.28
LINC00339-207ENST00000634712 NXF1Q9UBU9 619 aaKnown RBP16.82■□□□□ 0.28
LINC00339-207ENST00000634712 GABRDO14764 452 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 IKBKBO14920 756 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 CETN3O15182 167 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 SOAT2O75908 522 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 MICAL2O94851 1124 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 C4BPAP04003 597 aaKnown RBP16.81■□□□□ 0.28
LINC00339-207ENST00000634712 UBE2HP62256 183 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 DLG4P78352 724 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 CLDN10P78369 228 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 NCOA4Q13772 614 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 SLC5A9Q2M3M2 681 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 EDRF1Q3B7T1 1238 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 INTS6LQ5JSJ4 861 aaKnown RBP16.81■□□□□ 0.28
LINC00339-207ENST00000634712 TDRD10Q5VZ19 366 aaKnown RBP16.81■□□□□ 0.28
LINC00339-207ENST00000634712 HFE2Q6ZVN8 426 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 OSTM1Q86WC4 334 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 NPAS3Q8IXF0 933 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 SLC44A3Q8N4M1 653 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 TTC9BQ8N6N2 239 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 SPATA20Q8TB22 786 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 GZF1Q9H116 711 aaPredicted RBP16.81■□□□□ 0.28
LINC00339-207ENST00000634712 SMOC2Q9H3U7 446 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 GTF3C4Q9UKN8 822 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 FBXL21Q9UKT6 434 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 DUSP12Q9UNI6 340 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 NUMBLQ9Y6R0 609 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 TRIOO75962 3097 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 DOCK8Q8NF50 2099 aa16.81■□□□□ 0.28
LINC00339-207ENST00000634712 TSC2P49815 1807 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 ANHXE9PGG2 379 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 AKAP3O75969 853 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 FGF19O95750 216 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 STAU1O95793 577 aaKnown RBP16.8■□□□□ 0.28
LINC00339-207ENST00000634712 PDGFRBP09619 1106 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 FAM163BP0C2L3 166 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 HAPLN1P10915 354 aaPredicted RBP16.8■□□□□ 0.28
LINC00339-207ENST00000634712 CEBPBP17676 345 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 WARSP23381 471 aaKnown RBP16.8■□□□□ 0.28
LINC00339-207ENST00000634712 GNL1P36915 607 aaPredicted RBP16.8■□□□□ 0.28
LINC00339-207ENST00000634712 HTR4Q13639 388 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 ZNF699Q32M78 642 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 COBLL1Q53SF7 1204 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 ZNF667Q5HYK9 610 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 PRSS36Q5K4E3 855 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 ISM2Q6H9L7 571 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 PARM1Q6UWI2 310 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 BMP8AQ7Z5Y6 402 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 DNAJB7Q7Z6W7 309 aaPredicted RBP16.8■□□□□ 0.28
LINC00339-207ENST00000634712 SPATA2LQ8IUW3 424 aaPredicted RBP16.8■□□□□ 0.28
LINC00339-207ENST00000634712 SUGP1Q8IWZ8 645 aaKnown RBP16.8■□□□□ 0.28
LINC00339-207ENST00000634712 ST13P5Q8NFI4 369 aaPredicted RBP16.8■□□□□ 0.28
LINC00339-207ENST00000634712 OR6B3Q8NGW1 331 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 PSMG2Q969U7 264 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 TCEAL4Q96EI5 215 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 PI4K2AQ9BTU6 479 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 CDH9Q9ULB4 789 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 HCN4Q9Y3Q4 1203 aa16.8■□□□□ 0.28
LINC00339-207ENST00000634712 TACC1O75410 805 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 EPB41P11171 864 aaKnown RBP16.79■□□□□ 0.28
LINC00339-207ENST00000634712 P4HA1P13674 534 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 PPP1R2P41236 205 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 MAPRE1Q15691 268 aaKnown RBP16.79■□□□□ 0.28
LINC00339-207ENST00000634712 SGSM1Q2NKQ1 1148 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 C4orf50Q6ZRC1 276 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 LIMS2Q7Z4I7 341 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 GIPC2Q8TF65 315 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 KBTBD7Q8WVZ9 684 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 FGF14Q92915 247 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 ASIC4Q96FT7 647 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 SYT15Q9BQS2 421 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 GPR88Q9GZN0 384 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 DNAJC25Q9H1X3 360 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 MFSD1Q9H3U5 465 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 SLITRK6Q9H5Y7 841 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 TMLHEQ9NVH6 421 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 TECTAO75443 2155 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 NOTCH4Q99466 2003 aa16.79■□□□□ 0.28
LINC00339-207ENST00000634712 PSMA7O14818 248 aa16.78■□□□□ 0.28
LINC00339-207ENST00000634712 NARSO43776 548 aaKnown RBP16.78■□□□□ 0.28
LINC00339-207ENST00000634712 SRFP11831 508 aa16.78■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms