RNA–Protein interactions for RNA: ENST00000628118.1

CHD2-213, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 1 (best)

Gene CHD2, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-213ENST00000628118 TCEAL8Q8IYN2 117 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 SMRP1Q8NCR6 262 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 KREMEN2Q8NCW0 462 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 VN1R2Q8NFZ6 395 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 SPPL2BQ8TCT7 592 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 EEF2KMTQ96G04 330 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 CNOT6LQ96LI5 555 aaKnown RBP8.61□□□□□ -1.03
CHD2-213ENST00000628118 FAM81BQ96LP2 452 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 RIPOR3Q96MK2 946 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 MMS19Q96T76 1030 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 BPIFA3Q9BQP9 254 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 ZCWPW1Q9H0M4 648 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 ADAM7Q9H2U9 754 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 MAN1C1Q9NR34 630 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 RAB20Q9NX57 234 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 DDX43Q9NXZ2 648 aaKnown RBP8.61□□□□□ -1.03
CHD2-213ENST00000628118 CLEC1BQ9P126 229 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 CDH9Q9ULB4 789 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 L1RE1Q9UN81 338 aa8.61□□□□□ -1.03
CHD2-213ENST00000628118 TIMM13Q9Y5L4 95 aaPredicted RBP8.61□□□□□ -1.03
CHD2-213ENST00000628118 TSC2P49815 1807 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 WDR27A2RRH5 827 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 GTPBP10A4D1E9 387 aaKnown RBP8.6□□□□□ -1.03
CHD2-213ENST00000628118 SMTNL1A8MU46 457 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 LINC01565O15544 149 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 XYLBO75191 536 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 TPM2P07951 284 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 RPL17P18621 184 aaKnown RBP8.6□□□□□ -1.03
CHD2-213ENST00000628118 TBXAS1P24557 533 aaPredicted RBP8.6□□□□□ -1.03
CHD2-213ENST00000628118 MTHFRP42898 656 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 TUFMP49411 452 aaKnown RBP8.6□□□□□ -1.03
CHD2-213ENST00000628118 YWHAEP62258 255 aaKnown RBP8.6□□□□□ -1.03
CHD2-213ENST00000628118 NOP14P78316 857 aaKnown RBP8.6□□□□□ -1.03
CHD2-213ENST00000628118 MYL5Q02045 173 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 KCNH2Q12809 1159 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 CAMK2BQ13554 666 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 MAN2A1Q16706 1144 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 SOWAHAQ2M3V2 549 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 INTS6LQ5JSJ4 861 aaKnown RBP8.6□□□□□ -1.03
CHD2-213ENST00000628118 PPM1LQ5SGD2 360 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 ATAT1Q5SQI0 421 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 LLGL2Q6P1M3 1020 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 SYCE2Q6PIF2 218 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 C4orf50Q6ZRC1 276 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 UNC93AQ86WB7 457 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 PALB2Q86YC2 1186 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.6□□□□□ -1.03
CHD2-213ENST00000628118 ANKRD20A12PQ8NF67 263 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 TAS1R2Q8TE23 839 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 PTCD2Q8WV60 388 aaKnown RBP8.6□□□□□ -1.03
CHD2-213ENST00000628118 FUBP3Q96I24 572 aaKnown RBP eCLIP8.6□□□□□ -1.03
CHD2-213ENST00000628118 TNIP3Q96KP6 325 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 CEP295NLQ96MC4 621 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 ASB2Q96Q27 587 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 MED15Q96RN5 788 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 NIF3L1Q9GZT8 377 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 SNX25Q9H3E2 840 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 MMRN2Q9H8L6 949 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 ABCB6Q9NP58 842 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 WDR70Q9NW82 654 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 NXF1Q9UBU9 619 aaKnown RBP8.6□□□□□ -1.03
CHD2-213ENST00000628118 BARX2Q9UMQ3 279 aaPredicted RBP8.6□□□□□ -1.03
CHD2-213ENST00000628118 NFE2L3Q9Y4A8 694 aa8.6□□□□□ -1.03
CHD2-213ENST00000628118 TRANK1O15050 2925 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 GRXCR2A6NFK2 248 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 PRRG1O14668 218 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 ADAM12O43184 909 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 MBTPS2O43462 519 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 CLSTN1O94985 981 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 LRG1P02750 347 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 C8AP07357 584 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 GNL1P36915 607 aaPredicted RBP8.59□□□□□ -1.03
CHD2-213ENST00000628118 MTIF2P46199 727 aaKnown RBP8.59□□□□□ -1.03
CHD2-213ENST00000628118 ARPP19P56211 112 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 DLX2Q07687 328 aaPredicted RBP8.59□□□□□ -1.03
CHD2-213ENST00000628118 SMAD2Q15796 467 aaKnown RBP8.59□□□□□ -1.03
CHD2-213ENST00000628118 CBWD6Q4V339 395 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 TJAP1Q5JTD0 557 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 CBWD3Q5JTY5 395 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 CBWD5Q5RIA9 395 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 PTCRAQ6ISU1 281 aaPredicted RBP8.59□□□□□ -1.03
CHD2-213ENST00000628118 FAM171BQ6P995 826 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 RSPO2Q6UXX9 243 aaPredicted RBP8.59□□□□□ -1.03
CHD2-213ENST00000628118 GPR149Q86SP6 731 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 GLYCTKQ8IVS8 523 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 ELMOD1Q8N336 334 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 TMEM130Q8N3G9 435 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 LEMD2Q8NC56 503 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 OR6B3Q8NGW1 331 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 OR10T2Q8NGX3 314 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 GADD45GIP1Q8TAE8 222 aaPredicted RBP8.59□□□□□ -1.03
CHD2-213ENST00000628118 KBTBD7Q8WVZ9 684 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 SUSD6Q92537 303 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 NT5C1BQ96P26 610 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 RTP3Q9BQQ7 232 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 BCO2Q9BYV7 579 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 PRKD2Q9BZL6 878 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 S1PR5Q9H228 398 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 CYP4F11Q9HBI6 524 aa8.59□□□□□ -1.03
CHD2-213ENST00000628118 PRKAG3Q9UGI9 489 aa8.59□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms