RNA–Protein interactions for RNA: ENST00000625964.2

VBP1-204, Transcript of VHL binding protein 1, humanhuman

TSL 5 BASIC

Gene VBP1, Length 1,547 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VBP1-204ENST00000625964 ATAT1Q5SQI0 421 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 COLGALT2Q8IYK4 626 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 NSUN7Q8NE18 718 aaKnown RBP4.26□□□□□ -1.73
VBP1-204ENST00000625964 DIS3LQ8TF46 1054 aaKnown RBP4.26□□□□□ -1.73
VBP1-204ENST00000625964 DPF1Q92782 380 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 TMEM125Q96AQ2 219 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 FAM167AQ96KS9 214 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 CAMKK2Q96RR4 588 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 NOB1Q9ULX3 412 aaKnown RBP4.26□□□□□ -1.73
VBP1-204ENST00000625964 G3BP2Q9UN86 482 aaKnown RBP4.26□□□□□ -1.73
VBP1-204ENST00000625964 TRGV11A0A075B6L2 103 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 CCDC151A5D8V7 595 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 TOR1BO14657 336 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 RFPL1O75677 317 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 SCGB1D2O95969 90 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 RARBP10826 455 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 VAV2P52735 878 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 ZNF135P52742 658 aaPredicted RBP4.26□□□□□ -1.73
VBP1-204ENST00000625964 PPP2R5AQ15172 486 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 PREPLQ4J6C6 727 aaPredicted RBP4.26□□□□□ -1.73
VBP1-204ENST00000625964 CLNKQ7Z7G1 428 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 FAM90A1Q86YD7 464 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 PDSS2Q86YH6 399 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 CFAP52Q8N1V2 620 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 DDB2Q92466 427 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 SCAMP4Q969E2 229 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 MTFMTQ96DP5 389 aaKnown RBP4.26□□□□□ -1.73
VBP1-204ENST00000625964 C1GALT1C1Q96EU7 318 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 SLC35A4Q96G79 324 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 CDK5RAP3Q96JB5 506 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 AIFM3Q96NN9 605 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 CGRRF1Q99675 332 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 SMOQ99835 787 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 MRPL46Q9H2W6 279 aaKnown RBP4.26□□□□□ -1.73
VBP1-204ENST00000625964 UNKLQ9H9P5 680 aaKnown RBP4.26□□□□□ -1.73
VBP1-204ENST00000625964 PNPOQ9NVS9 261 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 RLIMQ9NVW2 624 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 KCTD5Q9NXV2 234 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 STXBP5LQ9Y2K9 1186 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 PCDHA1Q9Y5I3 950 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 EID1Q9Y6B2 187 aa4.26□□□□□ -1.73
VBP1-204ENST00000625964 CCDC195A0A1B0GUA6 201 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 E9PLN8 166 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 AHSGP02765 367 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 KCNA2P16389 499 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 FOXG1P55316 489 aaPredicted RBP4.25□□□□□ -1.73
VBP1-204ENST00000625964 FHL1Q13642 323 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 PLS1Q14651 629 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 LRRC41Q15345 812 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 TAPT1Q6NXT6 567 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 PPP1R3BQ86XI6 285 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 CHPFQ8IZ52 775 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 LNX2Q8N448 690 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 PTCD3Q96EY7 689 aaKnown RBP4.25□□□□□ -1.73
VBP1-204ENST00000625964 TRIB1Q96RU8 372 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 VKORC1Q9BQB6 163 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 ARMT1Q9H993 441 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 ANLNQ9NQW6 1124 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 IL17RBQ9NRM6 502 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 VSX1Q9NZR4 365 aaPredicted RBP4.25□□□□□ -1.73
VBP1-204ENST00000625964 TCEAL9Q9UHQ7 104 aa4.25□□□□□ -1.73
VBP1-204ENST00000625964 PRAMEF33A0A0G2JMD5 474 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 A0A1W2PS29 197 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 MANSC4A6NHS7 340 aaPredicted RBP4.24□□□□□ -1.73
VBP1-204ENST00000625964 POLRMTO00411 1230 aaKnown RBP4.24□□□□□ -1.73
VBP1-204ENST00000625964 TP73O15350 636 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 PPM1GO15355 546 aaPredicted RBP4.24□□□□□ -1.73
VBP1-204ENST00000625964 PRAMEF10O60809 474 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 GNAI2P04899 355 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 MYBP10242 640 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 LPOP22079 712 aaPredicted RBP4.24□□□□□ -1.73
VBP1-204ENST00000625964 ITPKBP27987 946 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 CCT4P50991 539 aaKnown RBP4.24□□□□□ -1.73
VBP1-204ENST00000625964 MC2RQ01718 297 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 FPGSQ05932 587 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 GTF2H3Q13889 308 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 KIF22Q14807 665 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 NFE2Q16621 373 aaPredicted RBP4.24□□□□□ -1.73
VBP1-204ENST00000625964 CD300EQ496F6 205 aaPredicted RBP4.24□□□□□ -1.73
VBP1-204ENST00000625964 MTX3Q5HYI7 312 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 EPM2AIP1Q7L775 607 aaPredicted RBP4.24□□□□□ -1.73
VBP1-204ENST00000625964 DENND1CQ8IV53 801 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 Q8NA96 180 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 PCSK9Q8NBP7 692 aaKnown RBP4.24□□□□□ -1.73
VBP1-204ENST00000625964 KLHDC4Q8TBB5 520 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 BRIX1Q8TDN6 353 aaKnown RBP4.24□□□□□ -1.73
VBP1-204ENST00000625964 TAAR9Q96RI9 348 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 WACQ9BTA9 647 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.24□□□□□ -1.73
VBP1-204ENST00000625964 CTTNBP2NLQ9P2B4 639 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 ZDHHC8Q9ULC8 765 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 NEU2Q9Y3R4 380 aa4.24□□□□□ -1.73
VBP1-204ENST00000625964 PRSS29PA6NIE9 313 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 VPS4BO75351 444 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 SUN1O94901 812 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 CHEK2O96017 543 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 HTR1BP28222 390 aa4.23□□□□□ -1.73
VBP1-204ENST00000625964 ANXA11P50995 505 aaKnown RBP4.23□□□□□ -1.73
VBP1-204ENST00000625964 RPS7P62081 194 aaKnown RBP4.23□□□□□ -1.73
VBP1-204ENST00000625964 TUBA4AP68366 448 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms