RNA–Protein interactions for RNA: ENST00000625151.1

LINC00552-201, long intergenic non-protein coding RNA 552, humanhuman

BASIC

Gene LINC00552, Length 2,579 nt, Biotype TEC.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00552-201ENST00000625151 UBN1Q9NPG3 1134 aa16.05■□□□□ 0.16
LINC00552-201ENST00000625151 NOP53Q9NZM5 478 aaKnown RBP16.05■□□□□ 0.16
LINC00552-201ENST00000625151 CHKBQ9Y259 395 aa16.05■□□□□ 0.16
LINC00552-201ENST00000625151 MAFGO15525 162 aa16.05■□□□□ 0.16
LINC00552-201ENST00000625151 BANF1O75531 89 aa16.05■□□□□ 0.16
LINC00552-201ENST00000625151 CCND1P24385 295 aa16.05■□□□□ 0.16
LINC00552-201ENST00000625151 MOGSQ13724 837 aa16.05■□□□□ 0.16
LINC00552-201ENST00000625151 RNASEH2BQ5TBB1 312 aaKnown RBP16.05■□□□□ 0.16
LINC00552-201ENST00000625151 FBF1Q8TES7 1133 aa16.05■□□□□ 0.16
LINC00552-201ENST00000625151 ZNF526Q8TF50 670 aaPredicted RBP16.05■□□□□ 0.16
LINC00552-201ENST00000625151 ERP27Q96DN0 273 aa16.05■□□□□ 0.16
LINC00552-201ENST00000625151 CGRRF1Q99675 332 aa16.05■□□□□ 0.16
LINC00552-201ENST00000625151 MSTO1Q9BUK6 570 aa16.05■□□□□ 0.16
LINC00552-201ENST00000625151 CNTNAP2Q9UHC6 1331 aa16.05■□□□□ 0.16
LINC00552-201ENST00000625151 LRRIQ4A6NIV6 560 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 GLRA2P23416 452 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 TBXAS1P24557 533 aaPredicted RBP16.04■□□□□ 0.16
LINC00552-201ENST00000625151 ZNF132P52740 706 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 ZNF280AP59817 542 aaPredicted RBP16.04■□□□□ 0.16
LINC00552-201ENST00000625151 SPARCL1Q14515 664 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 OASLQ15646 514 aaKnown RBP16.04■□□□□ 0.16
LINC00552-201ENST00000625151 SLC1A5Q15758 541 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 RSRC1Q96IZ7 334 aaKnown RBP16.04■□□□□ 0.16
LINC00552-201ENST00000625151 TMEM121Q9BTD3 319 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 FBXO40Q9UH90 709 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 hCG_1818297A0A087WSY0 165 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 A0A1W2PPM1 405 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 TCRBV5S1A1TA0A578 114 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 KIF1CO43896 1103 aaKnown RBP16.04■□□□□ 0.16
LINC00552-201ENST00000625151 DIAPH2O60879 1101 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 ATP4AP20648 1035 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 PSMC4P43686 418 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 VCPP55072 806 aaKnown RBP16.04■□□□□ 0.16
LINC00552-201ENST00000625151 SATB1Q01826 763 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 NCOA4Q13772 614 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 MORF4L2Q15014 288 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 MIEF2Q96C03 454 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 SMC6Q96SB8 1091 aa16.04■□□□□ 0.16
LINC00552-201ENST00000625151 GOLGA8SH3BPF8 625 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 GOLGA8MH3BSY2 632 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 K7ERI5 159 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 HARSP12081 509 aaKnown RBP16.03■□□□□ 0.16
LINC00552-201ENST00000625151 YARSP54577 528 aaKnown RBP16.03■□□□□ 0.16
LINC00552-201ENST00000625151 GAD2Q05329 585 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 MCL1Q07820 350 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 PDK4Q16654 411 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 XKR3Q5GH77 459 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 SNRNP48Q6IEG0 339 aaKnown RBP16.03■□□□□ 0.16
LINC00552-201ENST00000625151 UBR7Q8N806 425 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 NSUN6Q8TEA1 469 aaKnown RBP16.03■□□□□ 0.16
LINC00552-201ENST00000625151 TMEM237Q96Q45 408 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 TXLNGQ9NUQ3 528 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 A0A0B4J269 797 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 ALOX15BO15296 676 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 EDF1O60869 148 aaKnown RBP16.03■□□□□ 0.16
LINC00552-201ENST00000625151 CST3P01034 146 aaPredicted RBP16.03■□□□□ 0.16
LINC00552-201ENST00000625151 IFNB1P01574 187 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 PIGRP01833 764 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 FGFR1P11362 822 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 CA4P22748 312 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 TARSP26639 723 aaKnown RBP16.03■□□□□ 0.16
LINC00552-201ENST00000625151 SLC18A1P54219 525 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 LACTBP83111 547 aaPredicted RBP16.03■□□□□ 0.16
LINC00552-201ENST00000625151 PDIA2Q13087 525 aaKnown RBP16.03■□□□□ 0.16
LINC00552-201ENST00000625151 RGS9BPQ6ZS82 235 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 ANKMY2Q8IV38 441 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 MAK16Q9BXY0 300 aaKnown RBP16.03■□□□□ 0.16
LINC00552-201ENST00000625151 PORCNQ9H237 461 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 DONSONQ9NYP3 566 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 SMG5Q9UPR3 1016 aaKnown RBP16.03■□□□□ 0.16
LINC00552-201ENST00000625151 DRG1Q9Y295 367 aaKnown RBP16.03■□□□□ 0.16
LINC00552-201ENST00000625151 USH1CQ9Y6N9 552 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 LCTP09848 1927 aa16.03■□□□□ 0.16
LINC00552-201ENST00000625151 ADGRA2Q96PE1 1338 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 PHIPQ8WWQ0 1821 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 LRRD1A4D1F6 860 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 TYROBPO43914 113 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 SUPT20HL2P0C7V6 817 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 ABCD1P33897 745 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 CDKN2BP42772 138 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 GPX6P59796 221 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 SP2Q02086 613 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 SUPT20HL1Q3ZLR7 823 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 ZNF394Q53GI3 561 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 TFDP3Q5H9I0 405 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 DNAJC24Q6P3W2 148 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 VSIG1Q86XK7 387 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 REPS2Q8NFH8 660 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 DEPTORQ8TB45 409 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 ZNF570Q96NI8 536 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 SBF1O95248 1867 aa16.02■□□□□ 0.16
LINC00552-201ENST00000625151 SGK1O00141 431 aa16.02■□□□□ 0.15
LINC00552-201ENST00000625151 ECM2O94769 699 aaPredicted RBP16.02■□□□□ 0.15
LINC00552-201ENST00000625151 CALB1P05937 261 aa16.02■□□□□ 0.15
LINC00552-201ENST00000625151 ATP11AP98196 1134 aa16.02■□□□□ 0.15
LINC00552-201ENST00000625151 PLCB3Q01970 1234 aa16.02■□□□□ 0.15
LINC00552-201ENST00000625151 EFTUD2Q15029 972 aaKnown RBP eCLIP16.02■□□□□ 0.15
LINC00552-201ENST00000625151 SETDB1Q15047 1291 aa16.02■□□□□ 0.15
LINC00552-201ENST00000625151 LRRC38Q5VT99 294 aa16.02■□□□□ 0.15
LINC00552-201ENST00000625151 SLFN12LQ6IEE8 588 aa16.02■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms