RNA–Protein interactions for RNA: ENST00000621870.4

GGA3-223, Transcript of golgi associated, gamma adaptin ear containing, ARF binding protein 3, humanhuman

TSL 1 (best)

Gene GGA3, Length 4,034 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GGA3-223ENST00000621870 ANO4Q32M45 955 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 E4F1Q66K89 784 aaPredicted RBP9.69□□□□□ -0.86
GGA3-223ENST00000621870 LBX2Q6XYB7 198 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 FAM47EQ6ZV65 393 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 SZRD1Q7Z422 152 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 SLC51AQ86UW1 340 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 ANKMY2Q8IV38 441 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 GPATCH11Q8N954 259 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 ATP11CQ8NB49 1132 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 KIAA0895Q8NCT3 520 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 TTC8Q8TAM2 541 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 TATDN2Q93075 761 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 C9orf72Q96LT7 481 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 SYT15Q9BQS2 421 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 THAP2Q9H0W7 228 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 BLOC1S4Q9NUP1 217 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 SMARCAL1Q9NZC9 954 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 GTF3C4Q9UKN8 822 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 TRPV2Q9Y5S1 764 aa9.69□□□□□ -0.86
GGA3-223ENST00000621870 NRCAMQ92823 1304 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 CCDC85CA6NKD9 419 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 HSPA4LO95757 839 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 BAG2O95816 211 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 NCF2P19878 526 aaPredicted RBP9.68□□□□□ -0.86
GGA3-223ENST00000621870 KLRC2P26717 231 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 ADCY2Q08462 1091 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 ZSCAN26Q16670 478 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 HSDL1Q3SXM5 330 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 BOLA3Q53S33 107 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 SPATA24Q86W54 205 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 RNF217Q8TC41 542 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 RIN2Q8WYP3 895 aaPredicted RBP9.68□□□□□ -0.86
GGA3-223ENST00000621870 MAML1Q92585 1016 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 DCUN1D1Q96GG9 259 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 SYNDIG1Q9H7V2 258 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 KRT82Q9NSB4 513 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 SIGLEC1Q9BZZ2 1709 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 ITIH6Q6UXX5 1313 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 SLC12A8A0AV02 714 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 TMEM253P0C7T8 217 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 MCF2P10911 925 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 CYP11B1P15538 503 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 TAC1P20366 129 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 NR1D1P20393 614 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 GRK4P32298 578 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 BCAT1P54687 386 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 CDR2Q01850 454 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 IKBKEQ14164 716 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 HIF1AQ16665 826 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 ZPBP2Q6X784 338 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 ZNF677Q86XU0 584 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 WDR49Q8IV35 697 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 CCDC33Q8N5R6 958 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 IPMKQ8NFU5 416 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 SPIRE2Q8WWL2 714 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 PBXIP1Q96AQ6 731 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 SPATA17Q96L03 361 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 TACO1Q9BSH4 297 aaKnown RBP9.68□□□□□ -0.86
GGA3-223ENST00000621870 CIPCQ9C0C6 399 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 KIAA1257Q9ULG3 409 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 CDY2AQ9Y6F7 541 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 PMPCBO75439 489 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 GJB1P08034 283 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 RRM1P23921 792 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 SCNN1GP51170 649 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 CAV1Q03135 178 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 NCAPHQ15003 741 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 DBN1Q16643 649 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 SPRYD7Q5W111 196 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 FBXO38Q6PIJ6 1188 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 ANGPTL8Q6UXH0 198 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 SLC25A41Q8N5S1 370 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 CD99L2Q8TCZ2 262 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 DDI1Q8WTU0 396 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 HAS1Q92839 578 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 CATSPERBQ9H7T0 1116 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 LATS2Q9NRM7 1088 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 AIPL1Q9NZN9 384 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 PRDM4Q9UKN5 801 aa9.68□□□□□ -0.86
GGA3-223ENST00000621870 FAM47DPA6NHR8 397 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 TTI1O43156 1089 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 PSMD10O75832 226 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 CYP3A4P08684 503 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 LHX1P48742 406 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 RAB27AP51159 221 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 PMS1P54277 932 aaKnown RBP9.67□□□□□ -0.86
GGA3-223ENST00000621870 ARHGEF7Q14155 803 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 COBLL1Q53SF7 1204 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 SDE2Q6IQ49 451 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 DNAAF5Q86Y56 855 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 EDEM1Q92611 657 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 BTBD6Q96KE9 485 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 TRPV6Q9H1D0 765 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 VCX3BQ9H321 246 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 ASB7Q9H672 318 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 BCAP29Q9UHQ4 241 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP9.67□□□□□ -0.86
GGA3-223ENST00000621870 FAM187AA6NFU0 413 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 CABYRO75952 493 aa9.67□□□□□ -0.86
GGA3-223ENST00000621870 EGFRP00533 1210 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms