RNA–Protein interactions for RNA: ENST00000621676.4

VPS11-208, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS11, Length 3,313 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-208ENST00000621676 ACO1P21399 889 aaKnown RBP11.17□□□□□ -0.62
VPS11-208ENST00000621676 ASPAP45381 313 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 NME3Q13232 169 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 PTPN20Q4JDL3 420 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 MCOLN2Q8IZK6 566 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 SLC2A14Q8TDB8 520 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 SOCS4Q8WXH5 440 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 EDEM1Q92611 657 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 CEP41Q9BYV8 373 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 PTPRHQ9HD43 1115 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 ATP11BQ9Y2G3 1177 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 MROH7Q68CQ1 1323 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 SLC26A4O43511 780 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 CD48P09326 243 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 FECHP22830 423 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 GRK4P32298 578 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 SLCO1A2P46721 670 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 MEI1Q5TIA1 1274 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 ACAD10Q6JQN1 1059 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 ZC3H18Q86VM9 953 aaKnown RBP11.17□□□□□ -0.62
VPS11-208ENST00000621676 SCN4BQ8IWT1 228 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 DDX1Q92499 740 aaKnown RBP11.17□□□□□ -0.62
VPS11-208ENST00000621676 MTG1Q9BT17 334 aaPredicted RBP11.17□□□□□ -0.62
VPS11-208ENST00000621676 SELENOOQ9BVL4 669 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 SRRDQ9UH36 339 aa11.17□□□□□ -0.62
VPS11-208ENST00000621676 PSMA2P25787 234 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 FLT3P36888 993 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 ACLYP53396 1101 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 INHBEP58166 350 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 RTP1P59025 263 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 OGDHQ02218 1023 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 GOLGA7BQ2TAP0 167 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 SPOUT1Q5T280 376 aaKnown RBP11.16□□□□□ -0.62
VPS11-208ENST00000621676 ANKS1BQ7Z6G8 1248 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 DIS3LQ8TF46 1054 aaKnown RBP11.16□□□□□ -0.62
VPS11-208ENST00000621676 TMEM209Q96SK2 561 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 TTLL3Q9Y4R7 772 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 CEP83Q9Y592 693 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 ASAP2O43150 1006 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 RALAP11233 206 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 CYBAP13498 195 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 DNAJB2P25686 324 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 CYP2C18P33260 490 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 PRKCIP41743 596 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 MAP3K7CLP57077 242 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 MMRN1Q13201 1228 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 UBAP2Q5T6F2 1119 aaKnown RBP11.16□□□□□ -0.62
VPS11-208ENST00000621676 WDTC1Q8N5D0 677 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 C3orf58Q8NDZ4 430 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 TET1Q8NFU7 2136 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 GTF3C2Q8WUA4 911 aaPredicted RBP11.16□□□□□ -0.62
VPS11-208ENST00000621676 BHMTQ93088 406 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 EDEM3Q9BZQ6 932 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 SNX25Q9H3E2 840 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 HEY1Q9Y5J3 304 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 DICER1Q9UPY3 1922 aaKnown RBP11.16□□□□□ -0.62
VPS11-208ENST00000621676 ZSWIM8A7E2V4 1837 aa11.16□□□□□ -0.62
VPS11-208ENST00000621676 RRN3P2A6NIE6 340 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 B4GALT4O60513 344 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 BEST1O76090 585 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 TCP1P17987 556 aaKnown RBP11.15□□□□□ -0.62
VPS11-208ENST00000621676 GNL1P36915 607 aaPredicted RBP11.15□□□□□ -0.62
VPS11-208ENST00000621676 PITX1P78337 314 aaPredicted RBP11.15□□□□□ -0.62
VPS11-208ENST00000621676 PTPN11Q06124 597 aaPredicted RBP11.15□□□□□ -0.62
VPS11-208ENST00000621676 PAK2Q13177 524 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 WHAMMP3Q1A5X7 153 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 CLEC16AQ2KHT3 1053 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 PAPD7Q5XG87 772 aaKnown RBP11.15□□□□□ -0.62
VPS11-208ENST00000621676 DENND2CQ68D51 928 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 CDCA2Q69YH5 1023 aaPredicted RBP11.15□□□□□ -0.62
VPS11-208ENST00000621676 PMF1Q6P1K2 205 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 CC2D1AQ6P1N0 951 aaPredicted RBP11.15□□□□□ -0.62
VPS11-208ENST00000621676 RNF180Q86T96 592 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 C12orf56Q8IXR9 622 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 DBF4BQ8NFT6 615 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 HMX1Q9NP08 348 aaPredicted RBP11.15□□□□□ -0.62
VPS11-208ENST00000621676 CHST7Q9NS84 486 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 R3HDM2Q9Y2K5 976 aaKnown RBP11.15□□□□□ -0.62
VPS11-208ENST00000621676 CYB561D2O14569 222 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 MICAL2O94851 1124 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 KRT3P12035 628 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 APLP1P51693 650 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 RAD23BP54727 409 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 RBP5P82980 135 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 CDK17Q00537 523 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 MYO1EQ12965 1108 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 BSPRYQ5W0U4 402 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 MAATS1Q7Z4T9 603 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 ZNF280BQ86YH2 543 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 ZDHHC14Q8IZN3 488 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 OLIG1Q8TAK6 271 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 SYN2Q92777 582 aaPredicted RBP11.15□□□□□ -0.62
VPS11-208ENST00000621676 FAM107BQ9H098 131 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 FAM105AQ9NUU6 356 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 NME7Q9Y5B8 376 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 CASP8AP2Q9UKL3 1982 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 TMEM253P0C7T8 217 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 ACRP10323 421 aa11.15□□□□□ -0.62
VPS11-208ENST00000621676 RPL17P18621 184 aaKnown RBP11.15□□□□□ -0.62
VPS11-208ENST00000621676 PPP1R7Q15435 360 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms