RNA–Protein interactions for RNA: ENST00000616939.4

GPN1-212, Transcript of GPN-loop GTPase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GPN1, Length 1,832 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN1-212ENST00000616939 IP6K2Q9UHH9 426 aa16.4■□□□□ 0.22
GPN1-212ENST00000616939 TBX20Q9UMR3 447 aa16.4■□□□□ 0.22
GPN1-212ENST00000616939 KLF11O14901 512 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 FAM155BO75949 473 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 SLURP2P0DP57 97 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 ECE1P42892 770 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 FKBP1AP62942 108 aaKnown RBP16.39■□□□□ 0.21
GPN1-212ENST00000616939 NOMO3P69849 1222 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 PDIA2Q13087 525 aaKnown RBP16.39■□□□□ 0.21
GPN1-212ENST00000616939 MAMLD1Q13495 774 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 CUL3Q13618 768 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 RNF220Q5VTB9 566 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 FOXB2Q5VYV0 432 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 CCDC174Q6PII3 467 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 SV2AQ7L0J3 742 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 NET1Q7Z628 596 aaPredicted RBP16.39■□□□□ 0.21
GPN1-212ENST00000616939 ANKRD31Q8N7Z5 1873 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 GLIS1Q8NBF1 620 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 CPA5Q8WXQ8 436 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 PTPRN2Q92932 1015 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 GORASP1Q9BQQ3 440 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 KCNK13Q9HB14 408 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 ZNF148Q9UQR1 794 aa16.39■□□□□ 0.21
GPN1-212ENST00000616939 PPEF1O14829 653 aaPredicted RBP16.38■□□□□ 0.21
GPN1-212ENST00000616939 SLC16A4O15374 487 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 PLA2G6O60733 806 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 CD58P19256 250 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 QARSP47897 775 aaKnown RBP16.38■□□□□ 0.21
GPN1-212ENST00000616939 NEK3P51956 506 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 PRKD1Q15139 912 aaPredicted RBP16.38■□□□□ 0.21
GPN1-212ENST00000616939 HIF1AQ16665 826 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 RINLQ6ZS11 566 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 NLRX1Q86UT6 975 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 ZC3H18Q86VM9 953 aaKnown RBP16.38■□□□□ 0.21
GPN1-212ENST00000616939 FEZF2Q8TBJ5 459 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 TCP10LQ8TDR4 215 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 TMEM120AQ9BXJ8 343 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 GPAMQ9HCL2 828 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 KRT82Q9NSB4 513 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 TAS2R1Q9NYW7 299 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 SNCAIPQ9Y6H5 919 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 CFAP69A5D8W1 941 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 RNF8O76064 485 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 UPP2O95045 317 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 ESRRAP11474 423 aaPredicted RBP16.38■□□□□ 0.21
GPN1-212ENST00000616939 GARTP22102 1010 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 GLRA2P23416 452 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 SH3BGRP55822 239 aaPredicted RBP16.38■□□□□ 0.21
GPN1-212ENST00000616939 ARL4CP56559 192 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 SESN3P58005 492 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 SLC18A2Q05940 514 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 TRMT5Q32P41 509 aaKnown RBP16.38■□□□□ 0.21
GPN1-212ENST00000616939 CIAPIN1Q6FI81 312 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 SPOCD1Q6ZMY3 1216 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 TMEM161BQ8NDZ6 487 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 DCAKDQ8WVC6 231 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 SPIRE2Q8WWL2 714 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 CCDC127Q96BQ5 260 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 GBP5Q96PP8 586 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 PAFAH2Q99487 392 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 FAM118BQ9BPY3 351 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 TMX4Q9H1E5 349 aaPredicted RBP16.38■□□□□ 0.21
GPN1-212ENST00000616939 DMAP1Q9NPF5 467 aaPredicted RBP16.38■□□□□ 0.21
GPN1-212ENST00000616939 TOPORSQ9NS56 1045 aaPredicted RBP16.38■□□□□ 0.21
GPN1-212ENST00000616939 ANKEF1Q9NU02 776 aa16.38■□□□□ 0.21
GPN1-212ENST00000616939 DDX56Q9NY93 547 aaKnown RBP16.38■□□□□ 0.21
GPN1-212ENST00000616939 DHX15O43143 795 aaKnown RBP16.37■□□□□ 0.21
GPN1-212ENST00000616939 KRT1P04264 644 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 SERPINB2P05120 415 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 DLDP09622 509 aaKnown RBP16.37■□□□□ 0.21
GPN1-212ENST00000616939 ETV4P43268 484 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 PSMC4P43686 418 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 PEX3P56589 373 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 CLDN10P78369 228 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 CBLBQ13191 982 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 ADGRG6Q86SQ4 1221 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 PPIL6Q8IXY8 311 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 C4orf19Q8IY42 314 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 ABRAQ8N0Z2 381 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 DRAXINQ8NBI3 349 aaPredicted RBP16.37■□□□□ 0.21
GPN1-212ENST00000616939 PHC3Q8NDX5 983 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 SLC35B2Q8TB61 432 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 CCDC110Q8TBZ0 833 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 APOPT1Q96IL0 206 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 SENP7Q9BQF6 1050 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.37■□□□□ 0.21
GPN1-212ENST00000616939 ARHGEF4Q9NR80 690 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 PARVAQ9NVD7 372 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 DCTN4Q9UJW0 460 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 EFR3BQ9Y2G0 817 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 SIP14410 1827 aa16.37■□□□□ 0.21
GPN1-212ENST00000616939 hCG_1818297A0A087WSY0 165 aa16.36■□□□□ 0.21
GPN1-212ENST00000616939 DENND3A2RUS2 1198 aa16.36■□□□□ 0.21
GPN1-212ENST00000616939 RIMBP2O15034 1052 aa16.36■□□□□ 0.21
GPN1-212ENST00000616939 TLR3O15455 904 aaKnown RBP16.36■□□□□ 0.21
GPN1-212ENST00000616939 GDF11O95390 407 aa16.36■□□□□ 0.21
GPN1-212ENST00000616939 PIM1P11309 404 aaPredicted RBP16.36■□□□□ 0.21
GPN1-212ENST00000616939 SERPINB3P29508 390 aa16.36■□□□□ 0.21
GPN1-212ENST00000616939 PIK3CAP42336 1068 aa16.36■□□□□ 0.21
GPN1-212ENST00000616939 ZBTB16Q05516 673 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms