RNA–Protein interactions for RNA: ENST00000612540.1

PRKN-210, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 5 BASIC

Gene PRKN, Length 603 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-210ENST00000612540 KBTBD7Q8WVZ9 684 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 ATXN2LQ8WWM7 1075 aaKnown RBP13.68□□□□□ -0.22
PRKN-210ENST00000612540 PANX2Q96RD6 677 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 NT5C1AQ9BXI3 368 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 GPR62Q9BZJ7 368 aa13.68□□□□□ -0.22
PRKN-210ENST00000612540 LINC01553A4QN01 128 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 SYN3O14994 580 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 THAP12O43422 761 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 HCRTO43612 131 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 CALCAP01258 141 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 CA3P07451 260 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 SKILP12757 684 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 TYMPP19971 482 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 ACAT1P24752 427 aaKnown RBP13.67□□□□□ -0.22
PRKN-210ENST00000612540 BPIFB4P59827 614 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 YWHAHQ04917 246 aaPredicted RBP13.67□□□□□ -0.22
PRKN-210ENST00000612540 PTK2Q05397 1052 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 INCA1Q0VD86 236 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 TAF3Q5VWG9 929 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 KIAA1841Q6NSI8 718 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.67□□□□□ -0.22
PRKN-210ENST00000612540 THEM5Q8N1Q8 247 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 SYN2Q92777 582 aaPredicted RBP13.67□□□□□ -0.22
PRKN-210ENST00000612540 B3GALT6Q96L58 329 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 TWNKQ96RR1 684 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 ELOVL4Q9GZR5 314 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 DEF6Q9H4E7 631 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 SEPT11Q9NVA2 429 aaKnown RBP13.67□□□□□ -0.22
PRKN-210ENST00000612540 DDX43Q9NXZ2 648 aaKnown RBP13.67□□□□□ -0.22
PRKN-210ENST00000612540 AIPL1Q9NZN9 384 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 THEGQ9P2T0 379 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 MTUS1Q9ULD2 1270 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 RWDD3Q9Y3V2 267 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 PLXNA4Q9HCM2 1894 aa13.67□□□□□ -0.22
PRKN-210ENST00000612540 PRRC2BQ5JSZ5 2229 aaKnown RBP13.67□□□□□ -0.22
PRKN-210ENST00000612540 FGF18O76093 207 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 CYP11A1P05108 521 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 SERPING1P05155 500 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 BRD2P25440 801 aaKnown RBP13.66□□□□□ -0.22
PRKN-210ENST00000612540 PCSK1P29120 753 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 GNA15P30679 374 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 CA8P35219 290 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 CLCN1P35523 988 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 DEKP35659 375 aaKnown RBP13.66□□□□□ -0.22
PRKN-210ENST00000612540 LHX1P48742 406 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 RAD23BP54727 409 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 PSMC1P62191 440 aaKnown RBP13.66□□□□□ -0.22
PRKN-210ENST00000612540 KRT17Q04695 432 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 ZNF280DQ6N043 979 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 LIMS2Q7Z4I7 341 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 ACOT1Q86TX2 421 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 SLC47A2Q86VL8 602 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 UNC93AQ86WB7 457 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 SPATA18Q8TC71 538 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 CLP1Q92989 425 aaKnown RBP13.66□□□□□ -0.22
PRKN-210ENST00000612540 TMEM176AQ96HP8 235 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 HEXIM2Q96MH2 286 aaKnown RBP13.66□□□□□ -0.22
PRKN-210ENST00000612540 BAG1Q99933 345 aaPredicted RBP13.66□□□□□ -0.22
PRKN-210ENST00000612540 SYT15Q9BQS2 421 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 TTPALQ9BTX7 342 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 HERC2P3Q9BVR0 1158 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 PDCL3Q9H2J4 239 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 FAM124BQ9H5Z6 455 aaPredicted RBP13.66□□□□□ -0.22
PRKN-210ENST00000612540 ACP6Q9NPH0 428 aa13.66□□□□□ -0.22
PRKN-210ENST00000612540 C2CD2LO14523 706 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 ARHGEF15O94989 841 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 CSPG5O95196 566 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 URODP06132 367 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 PAEPP09466 180 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 FAM163BP0C2L3 166 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 FGFR3P22607 806 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 LMO2P25791 158 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 HNRNPH3P31942 346 aaKnown RBP13.65□□□□□ -0.22
PRKN-210ENST00000612540 SSTR3P32745 418 aaPredicted RBP13.65□□□□□ -0.22
PRKN-210ENST00000612540 ZNF132P52740 706 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 TSPY1Q01534 308 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 USP41Q3LFD5 358 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 CTXN3Q4LDR2 81 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 VARS2Q5ST30 1063 aaKnown RBP13.65□□□□□ -0.22
PRKN-210ENST00000612540 WDR59Q6PJI9 974 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 CYP26C1Q6V0L0 522 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 IRF2BP2Q7Z5L9 587 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 VPS36Q86VN1 386 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 LRRC8AQ8IWT6 810 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 MICALL1Q8N3F8 863 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 KLHL23Q8NBE8 558 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 SLC4A11Q8NBS3 891 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 CCDC112Q8NEF3 446 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 EPS8L1Q8TE68 723 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 WHAMMQ8TF30 809 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 SLC20A1Q8WUM9 679 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 RIN2Q8WYP3 895 aaPredicted RBP13.65□□□□□ -0.22
PRKN-210ENST00000612540 TNIP3Q96KP6 325 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 ASB2Q96Q27 587 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 C17orf80Q9BSJ5 609 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.65□□□□□ -0.22
PRKN-210ENST00000612540 DPEP3Q9H4B8 488 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 HAUS4Q9H6D7 363 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 FAM49BQ9NUQ9 324 aa13.65□□□□□ -0.22
PRKN-210ENST00000612540 CNTN6Q9UQ52 1028 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms