RNA–Protein interactions for RNA: ENST00000611950.1

PCDHGC3-202, Transcript of protocadherin gamma subfamily C, 3, humanhuman

APPRIS ALT2 BASIC

Gene PCDHGC3, Length 2,849 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGC3-202ENST00000611950 ATP4AP20648 1035 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 COILP38432 576 aaPredicted RBP11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 SNRNP35Q16560 246 aaKnown RBP11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 SGO2Q562F6 1265 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 KAZNQ674X7 775 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 SPOPLQ6IQ16 392 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 INTS8Q75QN2 995 aaKnown RBP11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 SLC13A5Q86YT5 568 aaPredicted RBP11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 FUKQ8N0W3 1084 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 LILRB2Q8N423 598 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 CCDC197Q8NCU1 140 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 ERP27Q96DN0 273 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 ZMAT2Q96NC0 199 aaKnown RBP11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 SRPK1Q96SB4 655 aaKnown RBP11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 IWS1Q96ST2 819 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 CDC42EP4Q9H3Q1 356 aaKnown RBP11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 FGFR1OP2Q9NVK5 253 aa11.3□□□□□ -0.6
PCDHGC3-202ENST00000611950 YWHABP31946 246 aaKnown RBP11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 PEX5P50542 639 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 BPIFB4P59827 614 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 MRPS9P82933 396 aaKnown RBP11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 PLOD1Q02809 727 aaPredicted RBP11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 KIF2BQ8N4N8 673 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 TTC39CQ8N584 583 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 ZNF280CQ8ND82 737 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 ATXN2LQ8WWM7 1075 aaKnown RBP11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 POMGNT1Q8WZA1 660 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 ZNF341Q9BYN7 854 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 DEFB129Q9H1M3 183 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 DCAF16Q9NXF7 216 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 SAGE1Q9NXZ1 904 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 WDR35Q9P2L0 1181 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 PFASO15067 1338 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 TBC1D12O60347 775 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 CFHP08603 1231 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 CYP11B1P15538 503 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 ADSSP30520 456 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 CHRNA3P32297 505 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 CALCOCO2Q13137 446 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 DHX34Q14147 1143 aaKnown RBP11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 TKFCQ3LXA3 575 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 TRIM50Q86XT4 487 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 PPP2R3CQ969Q6 453 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 ACSF2Q96CM8 615 aaPredicted RBP11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 C9orf72Q96LT7 481 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 ACCSQ96QU6 501 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 AGO4Q9HCK5 861 aaKnown RBP11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 NOCTQ9UK39 431 aaKnown RBP11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 FZD1Q9UP38 647 aa11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 R3HDM2Q9Y2K5 976 aaKnown RBP11.29□□□□□ -0.6
PCDHGC3-202ENST00000611950 TCP11X1B4DZS4 312 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 P4HBP07237 508 aaKnown RBP11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 PSMC4P43686 418 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 PDE6CP51160 858 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 PPIDQ08752 370 aaKnown RBP11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 MTMR1Q13613 665 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 ITGA7Q13683 1181 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 AUHQ13825 339 aaKnown RBP11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 PLCB4Q15147 1175 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 SEZ6Q53EL9 994 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 SH2D4BQ5SQS7 431 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 TMEM53Q6P2H8 277 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 SUN5Q8TC36 379 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 LZICQ8WZA0 190 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 CDCA5Q96FF9 252 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 TAAR1Q96RJ0 339 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 TMCO1Q9UM00 188 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 SLC45A1Q9Y2W3 748 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 DENND3A2RUS2 1198 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 TRIM43BA6NCK2 446 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 FAM187AA6NFU0 413 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 A6NJR5 290 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 MGRN1O60291 552 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 TMCC1O94876 653 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 SLC10A3P09131 477 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 TROVE2P10155 538 aaKnown RBP eCLIP11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 EIF3BP55884 814 aaKnown RBP11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 BLMHQ13867 455 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 ACCSLQ4AC99 568 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 ANGEL2Q5VTE6 544 aaKnown RBP11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 FAM47EQ6ZV65 393 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 YTHDF3Q7Z739 585 aaKnown RBP11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 EXOC3L1Q86VI1 746 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 EIF1ADQ8N9N8 165 aaKnown RBP11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 DEPTORQ8TB45 409 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 NSMCE1Q8WV22 266 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 CCT6BQ92526 530 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 ARHGEF2Q92974 986 aaKnown RBP11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 HAUS1Q96CS2 278 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 MAELQ96JY0 434 aaKnown RBP11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 ZNF317Q96PQ6 595 aaPredicted RBP11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 SAMD15Q9P1V8 674 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 TTC7AQ9ULT0 858 aaPredicted RBP11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 TRIM33Q9UPN9 1127 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 UBIAD1Q9Y5Z9 338 aa11.28□□□□□ -0.6
PCDHGC3-202ENST00000611950 TMEM120BA0PK00 339 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 PI4K2BG5E9Z4 385 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 PLS3P13797 630 aa11.27□□□□□ -0.6
PCDHGC3-202ENST00000611950 CD58P19256 250 aa11.27□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms