RNA–Protein interactions for RNA: ENST00000611725.4

SNX13-213, Transcript of sorting nexin 13, humanhuman

TSL 1 (best) BASIC

Gene SNX13, Length 6,817 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-213ENST00000611725 ERMARDQ5T6L9 678 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 PHF13Q86YI8 300 aaPredicted RBP6.7□□□□□ -1.34
SNX13-213ENST00000611725 SIX6OS1Q8N1H7 587 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 CCDC110Q8TBZ0 833 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 ART4Q93070 314 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 TTC17Q96AE7 1141 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 ACAP3Q96P50 834 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 LRRC37BQ96QE4 947 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 NINJ2Q9NZG7 142 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 PSMC3IPQ9P2W1 217 aaPredicted RBP6.7□□□□□ -1.34
SNX13-213ENST00000611725 NAALADL1Q9UQQ1 740 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 ADGRA3Q8IWK6 1321 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 COPEO14579 308 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 IRF6O14896 467 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 SPAG7O75391 227 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 GRAP2O75791 330 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 MMP13P45452 471 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 PTK6Q13882 451 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 TMEM132DQ14C87 1099 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 Q3C1V9 767 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 PLEKHA7Q6IQ23 1121 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 HACE1Q8IYU2 909 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 HPDLQ96IR7 371 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 TMEM121Q9BTD3 319 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 ASB7Q9H672 318 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 PPME1Q9Y570 386 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 M0QZ92 97 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 CXCL11O14625 94 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 MAFO75444 373 aaPredicted RBP6.7□□□□□ -1.34
SNX13-213ENST00000611725 INSRRP14616 1297 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 CHRNB2P17787 502 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 RFC1P35251 1148 aaPredicted RBP6.7□□□□□ -1.34
SNX13-213ENST00000611725 CLNS1AP54105 237 aaKnown RBP6.7□□□□□ -1.34
SNX13-213ENST00000611725 ORC1Q13415 861 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 PPP2R5DQ14738 602 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 HSDL1Q3SXM5 330 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 CFAP157Q5JU67 520 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 CPNE8Q86YQ8 564 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 DHX35Q9H5Z1 703 aaKnown RBP6.7□□□□□ -1.34
SNX13-213ENST00000611725 TMEM134Q9H6X4 195 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 RAB6BQ9NRW1 208 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 A0A087WZ62 844 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 ROR1Q01973 937 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 TFDP3Q5H9I0 405 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 RIBC1Q8N443 379 aaPredicted RBP6.7□□□□□ -1.34
SNX13-213ENST00000611725 FDXACB1Q9BRP7 624 aaPredicted RBP6.7□□□□□ -1.34
SNX13-213ENST00000611725 CHMP2BQ9UQN3 213 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 NUP188Q5SRE5 1749 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 ROBO1Q9Y6N7 1651 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 TMEM191CA6NGB0 347 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 HUS1O60921 280 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 GH1P01241 217 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 PCK1P35558 622 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 DNAJC3Q13217 504 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 LAMC2Q13753 1193 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 KYAT1Q16773 422 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 TRIM42Q8IWZ5 723 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 FAM71DQ8N9W8 422 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 BEST2Q8NFU1 509 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 ERP27Q96DN0 273 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 RILPQ96NA2 401 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 DDX23Q9BUQ8 820 aaKnown RBP6.7□□□□□ -1.34
SNX13-213ENST00000611725 PCDH9Q9HC56 1237 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 GPRC5DQ9NZD1 345 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 GRHL1Q9NZI5 618 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 DCTN4Q9UJW0 460 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 DNPEPQ9ULA0 475 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 GRIN2DO15399 1336 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 DNALI1O14645 258 aaPredicted RBP6.7□□□□□ -1.34
SNX13-213ENST00000611725 DDNO94850 711 aaPredicted RBP6.7□□□□□ -1.34
SNX13-213ENST00000611725 FAM47CQ5HY64 1035 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 LRRC6Q86X45 466 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 REPS2Q8NFH8 660 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 TMEM109Q9BVC6 243 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 STRA6Q9BX79 667 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 GCOM2Q9BZD3 368 aaPredicted RBP6.7□□□□□ -1.34
SNX13-213ENST00000611725 STAP1Q9ULZ2 295 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 TTLL3Q9Y4R7 772 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 USH1CQ9Y6N9 552 aa6.7□□□□□ -1.34
SNX13-213ENST00000611725 CFAP73A6NFT4 308 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 DCDC2CA8MYV0 355 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 DCTN3O75935 186 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 FSBPO95073 299 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 STAG3L1P0CL83 205 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 HNRNPH1P31943 449 aaKnown RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 COPS2P61201 443 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 LY6KQ17RY6 165 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 DAB2IPQ5VWQ8 1189 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 RIOX2Q8IUF8 465 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 PPIL6Q8IXY8 311 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 ALKBH8Q96BT7 664 aaKnown RBP6.69□□□□□ -1.34
SNX13-213ENST00000611725 CNPY3Q9BT09 278 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 MROH8Q9H579 483 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 HAUS2Q9NVX0 235 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 TAS2R40P59535 323 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 VGLL4Q14135 290 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 MORF4L2Q15014 288 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 BBS12Q6ZW61 710 aa6.69□□□□□ -1.34
SNX13-213ENST00000611725 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.69□□□□□ -1.34
SNX13-213ENST00000611725 CDKL3Q8IVW4 592 aaPredicted RBP6.69□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms