RNA–Protein interactions for RNA: ENST00000611723.1

CLTCL1-207, Transcript of clathrin heavy chain like 1, humanhuman

TSL 2

Gene CLTCL1, Length 838 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-207ENST00000611723 DDX53Q86TM3 631 aaKnown RBP17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 TMTC1Q8IUR5 882 aa17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 TMEM139Q8IV31 216 aa17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 CCDC112Q8NEF3 446 aa17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 TWNKQ96RR1 684 aa17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 BAG1Q99933 345 aaPredicted RBP17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 SYT11Q9BT88 431 aa17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 PLVAPQ9BX97 442 aa17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 DNAI2Q9GZS0 605 aa17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 CHST7Q9NS84 486 aa17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 TIMM13Q9Y5L4 95 aaPredicted RBP17.02■□□□□ 0.32
CLTCL1-207ENST00000611723 LAMA2P24043 3122 aaKnown RBP17.02■□□□□ 0.31
CLTCL1-207ENST00000611723 A8MXQ7 604 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 RB1P06400 928 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 SKILP12757 684 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 CYP11B1P15538 503 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 LMO2P25791 158 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 ANXA13P27216 316 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 TKTP29401 623 aaKnown RBP17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 ARID5AQ03989 594 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 USP41Q3LFD5 358 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 OVOS1Q6IE37 1185 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 CYP26C1Q6V0L0 522 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 SLC47A2Q86VL8 602 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 ZNF677Q86XU0 584 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 GPR65Q8IYL9 337 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 THEM5Q8N1Q8 247 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 EPS8L1Q8TE68 723 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 DDX1Q92499 740 aaKnown RBP17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 TMEM169Q96HH4 297 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 CHP1Q99653 195 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 RTP3Q9BQQ7 232 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 ACBD6Q9BR61 282 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 VN1R3Q9BXE9 311 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 OXCT2Q9BYC2 517 aaPredicted RBP17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 HAUS4Q9H6D7 363 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 DDX43Q9NXZ2 648 aaKnown RBP17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 ARHGAP20Q9P2F6 1191 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 HMGXB4Q9UGU5 601 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 CDH9Q9ULB4 789 aa17.01■□□□□ 0.31
CLTCL1-207ENST00000611723 PRUNE2Q8WUY3 3088 aa17■□□□□ 0.31
CLTCL1-207ENST00000611723 C5orf67F2Z3F1 127 aa17■□□□□ 0.31
CLTCL1-207ENST00000611723 TBC1D4O60343 1298 aa17■□□□□ 0.31
CLTCL1-207ENST00000611723 SOD2P04179 222 aa17■□□□□ 0.31
CLTCL1-207ENST00000611723 PDGFRBP09619 1106 aa17■□□□□ 0.31
CLTCL1-207ENST00000611723 VDRP11473 427 aa17■□□□□ 0.31
CLTCL1-207ENST00000611723 PCSK1P29120 753 aa17■□□□□ 0.31
CLTCL1-207ENST00000611723 KRT17Q04695 432 aa17■□□□□ 0.31
CLTCL1-207ENST00000611723 YWHAHQ04917 246 aaPredicted RBP17■□□□□ 0.31
CLTCL1-207ENST00000611723 ASTE1Q2TB18 679 aaPredicted RBP17■□□□□ 0.31
CLTCL1-207ENST00000611723 ZNF394Q53GI3 561 aa17■□□□□ 0.31
CLTCL1-207ENST00000611723 TAS1R1Q7RTX1 841 aa17■□□□□ 0.31
CLTCL1-207ENST00000611723 ZNF571Q7Z3V5 609 aaPredicted RBP17■□□□□ 0.31
CLTCL1-207ENST00000611723 NOP9Q86U38 636 aaKnown RBP17■□□□□ 0.31
CLTCL1-207ENST00000611723 TNIP3Q96KP6 325 aa17■□□□□ 0.31
CLTCL1-207ENST00000611723 SAMD11Q96NU1 681 aa17■□□□□ 0.31
CLTCL1-207ENST00000611723 TTPALQ9BTX7 342 aa17■□□□□ 0.31
CLTCL1-207ENST00000611723 HERC2P3Q9BVR0 1158 aa17■□□□□ 0.31
CLTCL1-207ENST00000611723 NOCTQ9UK39 431 aaKnown RBP17■□□□□ 0.31
CLTCL1-207ENST00000611723 H7C4K7 107 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 FGF18O76093 207 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 MYOGP15173 224 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 CHRNB2P17787 502 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 PTPN1P18031 435 aaKnown RBP16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 COL9A1P20849 921 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 GNA15P30679 374 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 PDE6CP51160 858 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 CCZ1BP86790 482 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 CCZ1P86791 482 aaPredicted RBP16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 GRIN2CQ14957 1233 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 CNGA2Q16280 664 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 HS1BP3Q53T59 392 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 VARS2Q5ST30 1063 aaKnown RBP16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 ARHGAP17Q68EM7 881 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 FAM171BQ6P995 826 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 ANKS3Q6ZW76 656 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 ACOT1Q86TX2 421 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 CCDC170Q8IYT3 715 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 OLIG1Q8TAK6 271 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 ZNF606Q8WXB4 792 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 HEXIM2Q96MH2 286 aaKnown RBP16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 AGPAT1Q99943 283 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 NHEJ1Q9H9Q4 299 aaPredicted RBP16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 ACP6Q9NPH0 428 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 LZTS1Q9Y250 596 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 VWA8A3KMH1 1905 aa16.99■□□□□ 0.31
CLTCL1-207ENST00000611723 OR6C75A6NL08 312 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 NRDCO43847 1150 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 PLEKP08567 350 aaPredicted RBP16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 EIF4A3P38919 411 aaKnown RBP16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 ERVK-21P61565 698 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 CDR2Q01850 454 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 DSG1Q02413 1049 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 STILQ15468 1287 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 RAB30Q15771 203 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 RTP2Q5QGT7 225 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 KIAA0319Q5VV43 1072 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 CEP57Q86XR8 500 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 KLHL23Q8NBE8 558 aa16.98■□□□□ 0.31
CLTCL1-207ENST00000611723 B3GALNT2Q8NCR0 500 aa16.98■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms