RNA–Protein interactions for RNA: ENST00000611426.4

CBWD3-207, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,381 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-207ENST00000611426 A0A087X0B3 334 aa23.43■■□□□ 1.34
CBWD3-207ENST00000611426 A0A1W2PRU2 124 aa23.43■■□□□ 1.34
CBWD3-207ENST00000611426 NCAM2O15394 837 aa23.43■■□□□ 1.34
CBWD3-207ENST00000611426 GDI1P31150 447 aa23.43■■□□□ 1.34
CBWD3-207ENST00000611426 STX1AQ16623 288 aa23.43■■□□□ 1.34
CBWD3-207ENST00000611426 SLC39A12Q504Y0 691 aa23.43■■□□□ 1.34
CBWD3-207ENST00000611426 ZC3H14Q6PJT7 736 aaKnown RBP23.43■■□□□ 1.34
CBWD3-207ENST00000611426 DNAJB7Q7Z6W7 309 aaPredicted RBP23.43■■□□□ 1.34
CBWD3-207ENST00000611426 TMC8Q8IU68 726 aa23.43■■□□□ 1.34
CBWD3-207ENST00000611426 TTC9BQ8N6N2 239 aa23.43■■□□□ 1.34
CBWD3-207ENST00000611426 PDILTQ8N807 584 aa23.43■■□□□ 1.34
CBWD3-207ENST00000611426 IQUBQ8NA54 791 aa23.43■■□□□ 1.34
CBWD3-207ENST00000611426 TRPV4Q9HBA0 871 aa23.43■■□□□ 1.34
CBWD3-207ENST00000611426 PANK4Q9NVE7 773 aa23.43■■□□□ 1.34
CBWD3-207ENST00000611426 HSFX1Q9UBD0 423 aa23.43■■□□□ 1.34
CBWD3-207ENST00000611426 LAMTOR5O43504 91 aa23.42■■□□□ 1.34
CBWD3-207ENST00000611426 SOAT2O75908 522 aa23.42■■□□□ 1.34
CBWD3-207ENST00000611426 LDHAP00338 332 aaKnown RBP23.42■■□□□ 1.34
CBWD3-207ENST00000611426 TARSP26639 723 aaKnown RBP23.42■■□□□ 1.34
CBWD3-207ENST00000611426 MAGEA9P43362 315 aa23.42■■□□□ 1.34
CBWD3-207ENST00000611426 TUFMP49411 452 aaKnown RBP23.42■■□□□ 1.34
CBWD3-207ENST00000611426 CASP5P51878 434 aa23.42■■□□□ 1.34
CBWD3-207ENST00000611426 ALCAMQ13740 583 aa23.42■■□□□ 1.34
CBWD3-207ENST00000611426 ITIH5Q86UX2 942 aa23.42■■□□□ 1.34
CBWD3-207ENST00000611426 SPATA20Q8TB22 786 aa23.42■■□□□ 1.34
CBWD3-207ENST00000611426 DEPDC1BQ8WUY9 529 aa23.42■■□□□ 1.34
CBWD3-207ENST00000611426 SAAL1Q96ER3 474 aa23.42■■□□□ 1.34
CBWD3-207ENST00000611426 ZCWPW1Q9H0M4 648 aa23.42■■□□□ 1.34
CBWD3-207ENST00000611426 ZNF334Q9HCZ1 680 aaPredicted RBP23.42■■□□□ 1.34
CBWD3-207ENST00000611426 FRMD3A2A2Y4 597 aa23.41■■□□□ 1.34
CBWD3-207ENST00000611426 KPNA7A9QM74 516 aa23.41■■□□□ 1.34
CBWD3-207ENST00000611426 LMNAP02545 664 aaKnown RBP23.41■■□□□ 1.34
CBWD3-207ENST00000611426 TFAMQ00059 246 aaKnown RBP23.41■■□□□ 1.34
CBWD3-207ENST00000611426 SV2CQ496J9 727 aa23.41■■□□□ 1.34
CBWD3-207ENST00000611426 WSCD1Q658N2 575 aa23.41■■□□□ 1.34
CBWD3-207ENST00000611426 MFSD6LQ8IWD5 586 aa23.41■■□□□ 1.34
CBWD3-207ENST00000611426 MAML2Q8IZL2 1156 aaPredicted RBP23.41■■□□□ 1.34
CBWD3-207ENST00000611426 FAM200AQ8TCP9 573 aa23.41■■□□□ 1.34
CBWD3-207ENST00000611426 PSMG2Q969U7 264 aa23.41■■□□□ 1.34
CBWD3-207ENST00000611426 E2F7Q96AV8 911 aa23.41■■□□□ 1.34
CBWD3-207ENST00000611426 SEPT5Q99719 369 aaPredicted RBP23.41■■□□□ 1.34
CBWD3-207ENST00000611426 CUEDC2Q9H467 287 aa23.41■■□□□ 1.34
CBWD3-207ENST00000611426 ANO10Q9NW15 660 aa23.41■■□□□ 1.34
CBWD3-207ENST00000611426 SERTAD1Q9UHV2 236 aa23.41■■□□□ 1.34
CBWD3-207ENST00000611426 TSC2P49815 1807 aa23.41■■□□□ 1.34
CBWD3-207ENST00000611426 HEPACAM2A8MVW5 462 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 MAN2B1O00754 1011 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 ZNF263O14978 683 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 FGF19O95750 216 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 GARTP22102 1010 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 CDR1P51861 262 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 MGAT5BQ3V5L5 792 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 BRSK2Q8IWQ3 736 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 CCDC65Q8IXS2 484 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 ZSWIM2Q8NEG5 633 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 CACTINQ8WUQ7 758 aaKnown RBP23.4■■□□□ 1.34
CBWD3-207ENST00000611426 CLDN23Q96B33 292 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 BORCS6Q96GS4 357 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 ZNF560Q96MR9 790 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 ATXN3LQ9H3M9 355 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 TMEM206Q9H813 350 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 MAGEF1Q9HAY2 307 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 TRPV5Q9NQA5 729 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 RBAKQ9NYW8 714 aaPredicted RBP23.4■■□□□ 1.34
CBWD3-207ENST00000611426 SPTBN4Q9H254 2564 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 PNPLA4P41247 253 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 WNT7BP56706 349 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 YAF2Q8IY57 180 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 NOC3LQ8WTT2 800 aaKnown RBP23.4■■□□□ 1.34
CBWD3-207ENST00000611426 FGFBP2Q9BYJ0 223 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 PCIF1Q9H4Z3 704 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 FBXO4Q9UKT5 387 aa23.4■■□□□ 1.34
CBWD3-207ENST00000611426 GOLGA8IPA6NC78 632 aa23.39■■□□□ 1.33
CBWD3-207ENST00000611426 SHISA7A6NL88 538 aa23.39■■□□□ 1.33
CBWD3-207ENST00000611426 GOLGA8JA6NMD2 632 aa23.39■■□□□ 1.33
CBWD3-207ENST00000611426 PRPF6O94906 941 aaKnown RBP23.39■■□□□ 1.33
CBWD3-207ENST00000611426 GABRR2P28476 465 aa23.39■■□□□ 1.33
CBWD3-207ENST00000611426 RPS9P46781 194 aaKnown RBP23.39■■□□□ 1.33
CBWD3-207ENST00000611426 SMARCB1Q12824 385 aa23.39■■□□□ 1.33
CBWD3-207ENST00000611426 VEPH1Q14D04 833 aa23.39■■□□□ 1.33
CBWD3-207ENST00000611426 STXBP5Q5T5C0 1151 aa23.39■■□□□ 1.33
CBWD3-207ENST00000611426 GAREM2Q75VX8 874 aa23.39■■□□□ 1.33
CBWD3-207ENST00000611426 LRRTM3Q86VH5 581 aa23.39■■□□□ 1.33
CBWD3-207ENST00000611426 GPIHBP1Q8IV16 184 aa23.39■■□□□ 1.33
CBWD3-207ENST00000611426 C2orf15Q8WU43 125 aaKnown RBP23.39■■□□□ 1.33
CBWD3-207ENST00000611426 LPIN3Q9BQK8 851 aa23.39■■□□□ 1.33
CBWD3-207ENST00000611426 CBWD1Q9BRT8 395 aa23.39■■□□□ 1.33
CBWD3-207ENST00000611426 LRRC27Q9C0I9 530 aa23.39■■□□□ 1.33
CBWD3-207ENST00000611426 NDRG2Q9UN36 371 aaKnown RBP23.39■■□□□ 1.33
CBWD3-207ENST00000611426 AGAP1Q9UPQ3 857 aa23.39■■□□□ 1.33
CBWD3-207ENST00000611426 ZNF292O60281 2723 aa23.38■■□□□ 1.33
CBWD3-207ENST00000611426 F5P12259 2224 aa23.38■■□□□ 1.33
CBWD3-207ENST00000611426 GVINP1Q7Z2Y8 2422 aa23.38■■□□□ 1.33
CBWD3-207ENST00000611426 EXTL3O43909 919 aa23.38■■□□□ 1.33
CBWD3-207ENST00000611426 ITGB3P05106 788 aa23.38■■□□□ 1.33
CBWD3-207ENST00000611426 MYL1P05976 194 aa23.38■■□□□ 1.33
CBWD3-207ENST00000611426 POLR2BP30876 1174 aaKnown RBP23.38■■□□□ 1.33
CBWD3-207ENST00000611426 CSTF1Q05048 431 aaKnown RBP23.38■■□□□ 1.33
CBWD3-207ENST00000611426 FZD5Q13467 585 aa23.38■■□□□ 1.33
CBWD3-207ENST00000611426 TAF12Q16514 161 aa23.38■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms