RNA–Protein interactions for RNA: ENST00000606782.1

CTSA-213, Transcript of cathepsin A, humanhuman

TSL 3

Gene CTSA, Length 582 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-213ENST00000606782 NKD2Q969F2 451 aaPredicted RBP14.39□□□□□ -0.11
CTSA-213ENST00000606782 FAM213AQ9BRX8 229 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 TRMT61BQ9BVS5 477 aaKnown RBP14.39□□□□□ -0.11
CTSA-213ENST00000606782 LTB4R2Q9NPC1 389 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 SLC27A5Q9Y2P5 690 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 MTF2Q9Y483 593 aaPredicted RBP14.39□□□□□ -0.11
CTSA-213ENST00000606782 OTOGLQ3ZCN5 2332 aa14.39□□□□□ -0.11
CTSA-213ENST00000606782 DMDP11532 3685 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 FANCMQ8IYD8 2048 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP14.38□□□□□ -0.11
CTSA-213ENST00000606782 FAM170BA6NMN3 283 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 LRRN2O75325 713 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 FGF19O95750 216 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 RPN1P04843 607 aaKnown RBP14.38□□□□□ -0.11
CTSA-213ENST00000606782 RPS9P46781 194 aaKnown RBP14.38□□□□□ -0.11
CTSA-213ENST00000606782 ASIC1P78348 528 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 FZD5Q13467 585 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 PNOCQ13519 176 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 TEAD2Q15562 447 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 SV2CQ496J9 727 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 WSCD1Q658N2 575 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 VITQ6UXI7 678 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 GAREM2Q75VX8 874 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 LRRTM3Q86VH5 581 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 METTL23Q86XA0 190 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 MFSD6LQ8IWD5 586 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 MAML2Q8IZL2 1156 aaPredicted RBP14.38□□□□□ -0.11
CTSA-213ENST00000606782 SYCP3Q8IZU3 236 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 THEM5Q8N1Q8 247 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 TTC9BQ8N6N2 239 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 LRRC52Q8N7C0 313 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 ZSCAN18Q8TBC5 510 aaPredicted RBP14.38□□□□□ -0.11
CTSA-213ENST00000606782 CACTINQ8WUQ7 758 aaKnown RBP14.38□□□□□ -0.11
CTSA-213ENST00000606782 IRF7Q92985 503 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 ZNF560Q96MR9 790 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 CBWD1Q9BRT8 395 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 BCO2Q9BYV7 579 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 HOOK1Q9UJC3 728 aaKnown RBP14.38□□□□□ -0.11
CTSA-213ENST00000606782 MIA3Q5JRA6 1907 aa14.38□□□□□ -0.11
CTSA-213ENST00000606782 COL4A3Q01955 1670 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 GPR179Q6PRD1 2367 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 ARNTLO00327 626 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 PRPF6O94906 941 aaKnown RBP14.37□□□□□ -0.11
CTSA-213ENST00000606782 SP9P0CG40 484 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 GJA1P17302 382 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 HOXD13P35453 343 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 VIPR2P41587 438 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 KCNB1Q14721 858 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 ZNF528Q3MIS6 628 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 SLC39A12Q504Y0 691 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 ZNF852Q6ZMS4 543 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 MAMSTRQ6ZN01 415 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 TPRG1Q6ZUI0 275 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 ITIH5Q86UX2 942 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 C1orf127Q8N9H9 656 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 SPATA18Q8TC71 538 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 SPPL2BQ8TCT7 592 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 SAAL1Q96ER3 474 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 MKNK1Q9BUB5 465 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 CLSTN2Q9H4D0 955 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 BRD9Q9H8M2 597 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 ZNF334Q9HCZ1 680 aaPredicted RBP14.37□□□□□ -0.11
CTSA-213ENST00000606782 HEBP1Q9NRV9 189 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 GDAP2Q9NXN4 497 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 RBAKQ9NYW8 714 aaPredicted RBP14.37□□□□□ -0.11
CTSA-213ENST00000606782 ITGA11Q9UKX5 1188 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 MRPS17Q9Y2R5 130 aaKnown RBP14.37□□□□□ -0.11
CTSA-213ENST00000606782 PCDHA5Q9Y5H7 936 aa14.37□□□□□ -0.11
CTSA-213ENST00000606782 COL4A2P08572 1712 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 VPS13AQ96RL7 3174 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 A0A1W2PRU2 124 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 MAN2B1O00754 1011 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 EIF3DO15371 548 aaKnown RBP eCLIP14.36□□□□□ -0.11
CTSA-213ENST00000606782 NCAM2O15394 837 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 RHOBTB3O94955 611 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 HAPLN1P10915 354 aaPredicted RBP14.36□□□□□ -0.11
CTSA-213ENST00000606782 CD72P21854 359 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 TARSP26639 723 aaKnown RBP14.36□□□□□ -0.11
CTSA-213ENST00000606782 TFAMQ00059 246 aaKnown RBP14.36□□□□□ -0.11
CTSA-213ENST00000606782 FCHO2Q0JRZ9 810 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 PSMD2Q13200 908 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 GRM2Q14416 872 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 UBXN2BQ14CS0 331 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 NFKBIBQ15653 356 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 CAMK4Q16566 473 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 KMT5BQ4FZB7 885 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 STXBP4Q6ZWJ1 553 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 EPM2AIP1Q7L775 607 aaPredicted RBP14.36□□□□□ -0.11
CTSA-213ENST00000606782 DCP1BQ8IZD4 617 aaKnown RBP14.36□□□□□ -0.11
CTSA-213ENST00000606782 TMEM86AQ8N2M4 240 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 GPD1LQ8N335 351 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 ZNF507Q8TCN5 953 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 GSDMAQ96QA5 445 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 IL21Q9HBE4 155 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 OBP2AQ9NY56 170 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 FBXO4Q9UKT5 387 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 AGAP1Q9UPQ3 857 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 WDR87Q6ZQQ6 2873 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 NCANO14594 1321 aa14.36□□□□□ -0.11
CTSA-213ENST00000606782 GOLGA8IPA6NC78 632 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms