RNA–Protein interactions for RNA: ENST00000605814.1

HMGB1P50-201, Transcript of high mobility group box 1 pseudogene 50, humanhuman

BASIC

Gene HMGB1P50, Length 607 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P50-201ENST00000605814 POLE2P56282 527 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 STX17P56962 302 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 ANTXR2P58335 489 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 CYP4F8P98187 520 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 POU5F1Q01860 360 aaKnown RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 PPARAQ07869 468 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 SSRP1Q08945 709 aaKnown RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 BTG3Q14201 252 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 CNGA2Q16280 664 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF827Q17R98 1081 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 CWF19L2Q2TBE0 894 aaKnown RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 CNPY1Q3B7I2 92 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 LIN52Q52LA3 116 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 CCDC92Q53HC0 331 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 HSP90AA4PQ58FG1 418 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 RNF220Q5VTB9 566 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 FOXB2Q5VYV0 432 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 RRAGBQ5VZM2 374 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 KLHL10Q6JEL2 608 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 NFRKBQ6P4R8 1299 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 DNAJC14Q6Y2X3 702 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 RGS9BPQ6ZS82 235 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF365Q70YC5 407 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 TMC3Q7Z5M5 1100 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 EXOC3L1Q86VI1 746 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 TMTC2Q8N394 836 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 NAT16Q8N8M0 369 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 GOLM1Q8NBJ4 401 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 SYT8Q8NBV8 401 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 LINC00116Q8NCU8 138 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 ERMNQ8TAM6 284 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 IGDCC4Q8TDY8 1250 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 DIS3LQ8TF46 1054 aaKnown RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 WDR60Q8WVS4 1066 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 CKAP2Q8WWK9 683 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 NELFBQ8WX92 580 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 LPIN2Q92539 896 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 CRELD1Q96HD1 420 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 SUCLG2Q96I99 432 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 HIC2Q96JB3 615 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 TEPSINQ96N21 525 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 CATSPER2Q96P56 530 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 GBP5Q96PP8 586 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 RPS6KC1Q96S38 1066 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 FAM167BQ9BTA0 163 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 IFIH1Q9BYX4 1025 aaKnown RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 MKRN2Q9H000 416 aaKnown RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 CSRNP2Q9H175 543 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 PABPC3Q9H361 631 aaKnown RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 UNC45AQ9H3U1 944 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 METTL14Q9HCE5 456 aaKnown RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 ABCF3Q9NUQ8 709 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 INTS9Q9NV88 658 aaKnown RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 USP40Q9NVE5 1235 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 STK32BQ9NY57 414 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 UTP6Q9NYH9 597 aaKnown RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 TAB2Q9NYJ8 693 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 ARHGAP20Q9P2F6 1191 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 HSFX1Q9UBD0 423 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 MAGEC2Q9UBF1 373 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 NKX1-2Q9UD57 310 aaPredicted RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 ZNF212Q9UDV6 495 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 VTI1BQ9UEU0 232 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 LRWD1Q9UFC0 647 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 LNPEPQ9UIQ6 1025 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 FBXL5Q9UKA1 691 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 FBXL21Q9UKT6 434 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 PAIP2BQ9ULR5 123 aaKnown RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 PA2G4Q9UQ80 394 aaKnown RBP4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 TMEM98Q9Y2Y6 226 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 SH3GLB1Q9Y371 365 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 WNK3Q9BYP7 1800 aa4.35□□□□□ -1.71
HMGB1P50-201ENST00000605814 BICDL2A1A5D9 508 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 FAM221AA4D161 298 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 TRIM75PA6NK02 468 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 GOLGA8BA8MQT2 603 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 TMEM110-MUSTN1A8MSY1 372 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 BTBD18B2RXH4 712 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 FOXP2O15409 715 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 TLR3O15455 904 aaKnown RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 CLEC3AO75596 197 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 RHOBTB3O94955 611 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 MBD4O95243 580 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 MOCS3O95396 460 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 DEXIO95424 95 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 FGFR1OPO95684 399 aaKnown RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 DDX58O95786 925 aaKnown RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 FGAP02671 866 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 AFPP02771 609 aaKnown RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 MMEP08473 750 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 TROVE2P10155 538 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 VCAM1P19320 739 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 CCNE1P24864 410 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 EIF4A3P38919 411 aaKnown RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 PRCPP42785 496 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 KCNC1P48547 511 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 TRAPPC10P48553 1259 aa4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 PTDSS1P48651 473 aaKnown RBP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 METAP2P50579 478 aaKnown RBP eCLIP4.34□□□□□ -1.71
HMGB1P50-201ENST00000605814 GUCY2FP51841 1108 aa4.34□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 17.4 ms