RNA–Protein interactions for RNA: ENST00000604164.5

CCDC12-209, Transcript of coiled-coil domain containing 12, humanhuman

TSL 3

Gene CCDC12, Length 399 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC12-209ENST00000604164 ATAD1Q8NBU5 361 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 ENGASEQ8NFI3 743 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 ITFG1Q8TB96 612 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 FAM200AQ8TCP9 573 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 PARD3BQ8TEW8 1205 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 ASIC4Q96FT7 647 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 SEPT5Q99719 369 aaPredicted RBP12.39□□□□□ -0.43
CCDC12-209ENST00000604164 TSG101Q99816 390 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 MFSD1Q9H3U5 465 aa12.39□□□□□ -0.43
CCDC12-209ENST00000604164 SCN1AP35498 2009 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 PTPRJQ12913 1337 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 GABRDO14764 452 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 CLSTN1O94985 981 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 MYL4P12829 197 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 TRIM21P19474 475 aaKnown RBP12.38□□□□□ -0.43
CCDC12-209ENST00000604164 WARSP23381 471 aaKnown RBP12.38□□□□□ -0.43
CCDC12-209ENST00000604164 PSMC2P35998 433 aaKnown RBP12.38□□□□□ -0.43
CCDC12-209ENST00000604164 RPL10AP62906 217 aaKnown RBP12.38□□□□□ -0.43
CCDC12-209ENST00000604164 PFKPQ01813 784 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 PNOCQ13519 176 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 SOWAHAQ2M3V2 549 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 ARHGAP15Q53QZ3 475 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 INTS6LQ5JSJ4 861 aaKnown RBP12.38□□□□□ -0.43
CCDC12-209ENST00000604164 PRSS36Q5K4E3 855 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 C4orf50Q6ZRC1 276 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 TAF4BQ92750 862 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 PSMG2Q969U7 264 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 E2F7Q96AV8 911 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 FUBP3Q96I24 572 aaKnown RBP eCLIP12.38□□□□□ -0.43
CCDC12-209ENST00000604164 GCNAQ96QF7 691 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 TMEM209Q96SK2 561 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 RTP3Q9BQQ7 232 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 SNX25Q9H3E2 840 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 ABI2Q9NYB9 513 aaPredicted RBP12.38□□□□□ -0.43
CCDC12-209ENST00000604164 CEP72Q9P209 647 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 WNT16Q9UBV4 365 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 ZMYM5Q9UJ78 669 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 CDH9Q9ULB4 789 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 SLC27A5Q9Y2P5 690 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 NUMBLQ9Y6R0 609 aa12.38□□□□□ -0.43
CCDC12-209ENST00000604164 CETN3O15182 167 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 STX10O60499 249 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 TACC1O75410 805 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 ECI2O75521 394 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 VNN2O95498 520 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 HAPLN1P10915 354 aaPredicted RBP12.37□□□□□ -0.43
CCDC12-209ENST00000604164 CDC25CP30307 473 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 VAMP7P51809 220 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 NUBP1P53384 320 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 ADAM9Q13443 819 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 NCOA4Q13772 614 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 SLC5A9Q2M3M2 681 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 SGSM1Q2NKQ1 1148 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 ZNF699Q32M78 642 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 WDR72Q3MJ13 1102 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 LIMS2Q7Z4I7 341 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 DNAJB7Q7Z6W7 309 aaPredicted RBP12.37□□□□□ -0.43
CCDC12-209ENST00000604164 SPATA2LQ8IUW3 424 aaPredicted RBP12.37□□□□□ -0.43
CCDC12-209ENST00000604164 FAM186BQ8IYM0 893 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 SPATA20Q8TB22 786 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 ING5Q8WYH8 240 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 CEP295NLQ96MC4 621 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 MKNK1Q9BUB5 465 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 IMPG2Q9BZV3 1241 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 DNAI2Q9GZS0 605 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 VRTNQ9H8Y1 702 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 ZFP14Q9HCL3 533 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 SLC2A4RGQ9NR83 387 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 UXTQ9UBK9 157 aaPredicted RBP12.37□□□□□ -0.43
CCDC12-209ENST00000604164 MAPK8IP1Q9UQF2 711 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 PCDHA5Q9Y5H7 936 aa12.37□□□□□ -0.43
CCDC12-209ENST00000604164 LRRIQ3A6PVS8 624 aaPredicted RBP12.36□□□□□ -0.43
CCDC12-209ENST00000604164 PSMA7O14818 248 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 CST3P01034 146 aaPredicted RBP12.36□□□□□ -0.43
CCDC12-209ENST00000604164 CSH1P0DML2 217 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 CSH2P0DML3 217 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 EPB41P11171 864 aaKnown RBP12.36□□□□□ -0.43
CCDC12-209ENST00000604164 CEBPBP17676 345 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 RFX1P22670 979 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 GTF2H1P32780 548 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 GNL1P36915 607 aaPredicted RBP12.36□□□□□ -0.43
CCDC12-209ENST00000604164 MYL6P60660 151 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 UBE2HP62256 183 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 LRRC63Q05C16 580 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 CFAP221Q4G0U5 840 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 ZNF667Q5HYK9 610 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 PARM1Q6UWI2 310 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 LRRTM3Q86VH5 581 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 CCDC150Q8NCX0 1101 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 RSAD2Q8WXG1 361 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 ZNF516Q92618 1163 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 ELSPBP1Q96BH3 223 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 MCRS1Q96EZ8 462 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 SHDQ96IW2 340 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 SYT15Q9BQS2 421 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 SLITRK6Q9H5Y7 841 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 EHD2Q9NZN4 543 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 TSC2P49815 1807 aa12.36□□□□□ -0.43
CCDC12-209ENST00000604164 C4BPAP04003 597 aaKnown RBP12.35□□□□□ -0.43
CCDC12-209ENST00000604164 ACAT1P24752 427 aaKnown RBP12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms