RNA–Protein interactions for RNA: ENST00000601981.5

UPF1-213, Transcript of UPF1, RNA helicase and ATPase, humanhuman

TSL 5

Gene UPF1, Length 556 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF1-213ENST00000601981 TOP6BLQ8N6T0 577 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 FBXL13Q8NEE6 735 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 SPATA18Q8TC71 538 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 RIN2Q8WYP3 895 aaPredicted RBP10.78□□□□□ -0.68
UPF1-213ENST00000601981 PIK3R5Q8WYR1 880 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 ZNF516Q92618 1163 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 CHP1Q99653 195 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 CRACR2AQ9BSW2 395 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 DESI2Q9BSY9 194 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 CHST7Q9NS84 486 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 GDAP2Q9NXN4 497 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 GCNT4Q9P109 453 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 DPP7Q9UHL4 492 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 SIX4Q9UIU6 781 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 SNX9Q9Y5X1 595 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 MTCH2Q9Y6C9 303 aa10.78□□□□□ -0.68
UPF1-213ENST00000601981 EPN1Q9Y6I3 576 aaPredicted RBP10.78□□□□□ -0.68
UPF1-213ENST00000601981 MYH10P35580 1976 aa10.77□□□□□ -0.68
UPF1-213ENST00000601981 PPEF2O14830 753 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 NDUFA10O95299 355 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 EFEMP2O95967 443 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 HLA-DRAP01903 254 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 RFX1P22670 979 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 DNAJB1P25685 340 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 TKTP29401 623 aaKnown RBP10.77□□□□□ -0.69
UPF1-213ENST00000601981 NDUFV1P49821 464 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 MYL6P60660 151 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 POLR2FP61218 127 aaKnown RBP10.77□□□□□ -0.69
UPF1-213ENST00000601981 WDR72Q3MJ13 1102 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 VARS2Q5ST30 1063 aaKnown RBP10.77□□□□□ -0.69
UPF1-213ENST00000601981 OVOS1Q6IE37 1185 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 C15orf39Q6ZRI6 1047 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 MICALL1Q8N3F8 863 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 MRPL43Q8N983 215 aaKnown RBP10.77□□□□□ -0.69
UPF1-213ENST00000601981 FAXDC2Q96IV6 333 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 GUCD1Q96NT3 240 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 MMS19Q96T76 1030 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 VN1R3Q9BXE9 311 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 TLE6Q9H808 572 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 VRTNQ9H8Y1 702 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 SIX2Q9NPC8 291 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 FNIP2Q9P278 1114 aa10.77□□□□□ -0.69
UPF1-213ENST00000601981 SPTBN5Q9NRC6 3674 aaKnown RBP10.77□□□□□ -0.69
UPF1-213ENST00000601981 SSU72P8A0A1W2PR75 194 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 C2orf71A6NGG8 1288 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 OR6C75A6NL08 312 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 EIF3CLB5ME19 914 aaKnown RBP10.76□□□□□ -0.69
UPF1-213ENST00000601981 I3L4J1 428 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 IPO7O95373 1038 aaKnown RBP10.76□□□□□ -0.69
UPF1-213ENST00000601981 ASS1P00966 412 aaKnown RBP10.76□□□□□ -0.69
UPF1-213ENST00000601981 CST3P01034 146 aaPredicted RBP10.76□□□□□ -0.69
UPF1-213ENST00000601981 CYP11A1P05108 521 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 FAM163BP0C2L3 166 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 UCHL3P15374 230 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 SLC9A1P19634 815 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 KLRC2P26717 231 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 IRS1P35568 1242 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 LHX1P48742 406 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 TERF1P54274 439 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 NOP14P78316 857 aaKnown RBP10.76□□□□□ -0.69
UPF1-213ENST00000601981 KRT83P78385 493 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 CAMK1Q14012 370 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 ADGRE1Q14246 886 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 CTXN3Q4LDR2 81 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 CBWD6Q4V339 395 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 CBWD3Q5JTY5 395 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 RTP2Q5QGT7 225 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 CBWD5Q5RIA9 395 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 C1orf220Q5T0J3 134 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 SFMBT2Q5VUG0 894 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 KIAA0319Q5VV43 1072 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 TRIM65Q6PJ69 517 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 CD300LGQ6UXG3 332 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 ZNF662Q6ZS27 426 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 TAS1R1Q7RTX1 841 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 FMNL3Q8IVF7 1028 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 ADGRF2Q8IZF7 708 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 TTC39CQ8N584 583 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 ACRBPQ8NEB7 543 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 CXorf38Q8TB03 319 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 TAS1R2Q8TE23 839 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 FAM84AQ96KN4 292 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 EIF3CQ99613 913 aaKnown RBP10.76□□□□□ -0.69
UPF1-213ENST00000601981 INTS2Q9H0H0 1204 aaKnown RBP10.76□□□□□ -0.69
UPF1-213ENST00000601981 SNX25Q9H3E2 840 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 NHEJ1Q9H9Q4 299 aaPredicted RBP10.76□□□□□ -0.69
UPF1-213ENST00000601981 NLRC4Q9NPP4 1024 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 RAB20Q9NX57 234 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 AIPL1Q9NZN9 384 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 MTRRQ9UBK8 725 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 NXF1Q9UBU9 619 aaKnown RBP10.76□□□□□ -0.69
UPF1-213ENST00000601981 BACE2Q9Y5Z0 518 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 PLXNA3P51805 1871 aa10.76□□□□□ -0.69
UPF1-213ENST00000601981 SPDYE4A6NLX3 237 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 SPTLC1O15269 473 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 OAZ2O95190 189 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 LCA5LO95447 670 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 VNN1O95497 513 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 C1RP00736 705 aa10.75□□□□□ -0.69
UPF1-213ENST00000601981 SERPING1P05155 500 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms