RNA–Protein interactions for RNA: ENST00000601392.5

CELF4-222, Transcript of CUGBP Elav-like family member 4, human

TSL 1 (best)

Gene CELF4, Length 989 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CELF4-222	ENST00000601392	C10orf76	Q5T2E6	689 aa		13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	TMEM86A	Q8N2M4	240 aa		13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	COLGALT1	Q8NBJ5	622 aa		13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	FAM193B	Q96PV7	902 aa	Predicted RBP	13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	NXF1	Q9UBU9	619 aa	Known RBP	13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	BARX2	Q9UMQ3	279 aa	Predicted RBP	13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	PCDHB4	Q9Y5E5	795 aa		13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	SNX9	Q9Y5X1	595 aa		13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	MYO7A	Q13402	2215 aa		13.62	□□□□□ -0.23
CELF4-222	ENST00000601392	CIT	O14578	2027 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392		M0QZQ0	153 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	PPEF2	O14830	753 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	CYP26A1	O43174	497 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	CCP110	O43303	1012 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	HUS1	O60921	280 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	CILP	O75339	1184 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	DDHD2	O94830	711 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	NDUFA10	O95299	355 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	ALDH2	P05091	517 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	CYP11B1	P15538	503 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	EIF4A3	P38919	411 aa	Known RBP	13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	SLC18A3	Q16572	532 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	SOWAHA	Q2M3V2	549 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	RAD9B	Q6WBX8	426 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	ZNF662	Q6ZS27	426 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	SLC30A5	Q8TAD4	765 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	POF1B	Q8WVV4	589 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	ZNF558	Q96NG5	402 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	ARID3A	Q99856	593 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	GOLGA2P5	Q9HBQ8	144 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	CLDND1	Q9NY35	253 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	EIF2AK3	Q9NZJ5	1116 aa	Known RBP	13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	HCST	Q9UBK5	93 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	DSE	Q9UL01	958 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	INPP5F	Q9Y2H2	1132 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	ATP8B3	O60423	1300 aa		13.61	□□□□□ -0.23
CELF4-222	ENST00000601392	SOWAHD	A6NJG2	315 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	TNFRSF10A	O00220	468 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	GABRD	O14764	452 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	SPTLC1	O15269	473 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	TRAPPC3	O43617	180 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	NCK2	O43639	380 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	AKR1B10	O60218	316 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	IPO7	O95373	1038 aa	Known RBP	13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	CYP11A1	P05108	521 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	WEE2	P0C1S8	567 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	GZMA	P12544	262 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	WARS	P23381	471 aa	Known RBP	13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	PPM1A	P35813	382 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	UBE3A	Q05086	875 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	RNASEL	Q05823	741 aa	Known RBP	13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	TDRD12	Q587J7	1177 aa	Known RBP	13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	PPP1R2P3	Q6NXS1	205 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	TMEM270	Q6UE05	265 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	CD300LG	Q6UXG3	332 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	ZNF571	Q7Z3V5	609 aa	Predicted RBP	13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	ZNF280B	Q86YH2	543 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	CRYBG2	Q8N1P7	616 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	TXLNB	Q8N3L3	684 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	RBBP8NL	Q8NC74	664 aa	Predicted RBP	13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	APPL2	Q8NEU8	664 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	SPPL3	Q8TCT6	385 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	MICAL1	Q8TDZ2	1067 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	EPS8L1	Q8TE68	723 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	WHAMM	Q8TF30	809 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	DDX1	Q92499	740 aa	Known RBP	13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	PABPC5	Q96DU9	382 aa	Known RBP	13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	TMEM176A	Q96HP8	235 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	SENP8	Q96LD8	212 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	MMS19	Q96T76	1030 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	AGPAT1	Q99943	283 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	COLEC11	Q9BWP8	271 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	SDCBP2	Q9H190	292 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	DEF6	Q9H4E7	631 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	IGFLR1	Q9H665	355 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	NRDE2	Q9H7Z3	1164 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	LUC7L	Q9NQ29	371 aa	Known RBP	13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	NOCT	Q9UK39	431 aa	Known RBP	13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	POLI	Q9UNA4	740 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	ADGRG1	Q9Y653	693 aa		13.6	□□□□□ -0.23
CELF4-222	ENST00000601392	CASTOR2	A6NHX0	329 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392		H3BQ06	376 aa	Predicted RBP	13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	CYB561D2	O14569	222 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	ZSCAN12	O43309	604 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	FGF18	O76093	207 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	B3GAT3	O94766	335 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	BMP1	P13497	986 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	KRT5	P13647	590 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	TYMP	P19971	482 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	TNFAIP3	P21580	790 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	DNAJB1	P25685	340 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	USP8	P40818	1118 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	LHX1	P48742	406 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	PDE6C	P51160	858 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	KIF11	P52732	1056 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	RAD23B	P54727	409 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	CDR2	Q01850	454 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	ARID5A	Q03989	594 aa		13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	ELAVL2	Q12926	359 aa	Known RBP	13.59	□□□□□ -0.23
CELF4-222	ENST00000601392	STIL	Q15468	1287 aa		13.59	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms