RNA–Protein interactions for RNA: ENST00000600911.5

IRF3-227, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-227ENST00000600911 GOLGA6L6A8MZA4 724 aa24.44■■□□□ 1.5
IRF3-227ENST00000600911 TYMPP19971 482 aa24.44■■□□□ 1.5
IRF3-227ENST00000600911 VARS2Q5ST30 1063 aaKnown RBP24.44■■□□□ 1.5
IRF3-227ENST00000600911 OVOS1Q6IE37 1185 aa24.44■■□□□ 1.5
IRF3-227ENST00000600911 PRSS55Q6UWB4 352 aaPredicted RBP24.44■■□□□ 1.5
IRF3-227ENST00000600911 RAD9BQ6WBX8 426 aa24.44■■□□□ 1.5
IRF3-227ENST00000600911 TMEM86AQ8N2M4 240 aa24.44■■□□□ 1.5
IRF3-227ENST00000600911 LNX1Q8TBB1 728 aaPredicted RBP24.44■■□□□ 1.5
IRF3-227ENST00000600911 TMEM176AQ96HP8 235 aa24.44■■□□□ 1.5
IRF3-227ENST00000600911 SNX25Q9H3E2 840 aa24.44■■□□□ 1.5
IRF3-227ENST00000600911 CRTAC1Q9NQ79 661 aa24.44■■□□□ 1.5
IRF3-227ENST00000600911 PTPRDP23468 1912 aa24.44■■□□□ 1.5
IRF3-227ENST00000600911 FGF18O76093 207 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 OR4Q2P0C623 313 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 EIF4A3P38919 411 aaKnown RBP24.43■■□□□ 1.5
IRF3-227ENST00000600911 KLHL30Q0D2K2 578 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 MRPL58Q14197 206 aaKnown RBP24.43■■□□□ 1.5
IRF3-227ENST00000600911 DNAAF5Q86Y56 855 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 TDHQ8IZJ6 230 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 AUTS2Q8WXX7 1259 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 BAG1Q99933 345 aaPredicted RBP24.43■■□□□ 1.5
IRF3-227ENST00000600911 NT5C1AQ9BXI3 368 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 NUCKS1Q9H1E3 243 aaKnown RBP24.43■■□□□ 1.5
IRF3-227ENST00000600911 PCDHA11Q9Y5I1 949 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 SERPING1P05155 500 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 MMEP08473 750 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 GNA15P30679 374 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 CTNNB1P35222 781 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 BMPR1AP36894 532 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 YWHAEP62258 255 aaKnown RBP24.43■■□□□ 1.5
IRF3-227ENST00000600911 TAP1Q03518 808 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 ASTE1Q2TB18 679 aaPredicted RBP24.43■■□□□ 1.5
IRF3-227ENST00000600911 TDRD12Q587J7 1177 aaKnown RBP24.43■■□□□ 1.5
IRF3-227ENST00000600911 LRRTM3Q86VH5 581 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 TMEM169Q96HH4 297 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 PCDHB18PQ96TA0 734 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 NKX2-4Q9H2Z4 354 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 FAM49BQ9NUQ9 324 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 TMLHEQ9NVH6 421 aa24.43■■□□□ 1.5
IRF3-227ENST00000600911 MYBPHLA2RUH7 354 aa24.42■■□□□ 1.5
IRF3-227ENST00000600911 SYN3O14994 580 aa24.42■■□□□ 1.5
IRF3-227ENST00000600911 DNAJB1P25685 340 aa24.42■■□□□ 1.5
IRF3-227ENST00000600911 FMO1Q01740 532 aa24.42■■□□□ 1.5
IRF3-227ENST00000600911 YWHAHQ04917 246 aaPredicted RBP24.42■■□□□ 1.5
IRF3-227ENST00000600911 PDZRN4Q6ZMN7 1036 aaPredicted RBP24.42■■□□□ 1.5
IRF3-227ENST00000600911 UNC93AQ86WB7 457 aa24.42■■□□□ 1.5
IRF3-227ENST00000600911 PKMYT1Q99640 499 aa24.42■■□□□ 1.5
IRF3-227ENST00000600911 ALG13Q9NP73 1137 aaKnown RBP24.42■■□□□ 1.5
IRF3-227ENST00000600911 CHST7Q9NS84 486 aa24.42■■□□□ 1.5
IRF3-227ENST00000600911 PCDHB12Q9Y5F1 795 aa24.42■■□□□ 1.5
IRF3-227ENST00000600911 MYH10P35580 1976 aa24.41■■□□□ 1.5
IRF3-227ENST00000600911 HSFX4A0A1B0GTS1 333 aaPredicted RBP24.41■■□□□ 1.5
IRF3-227ENST00000600911 HSFX3A0A1B0GWH4 333 aaPredicted RBP24.41■■□□□ 1.5
IRF3-227ENST00000600911 ADAM12O43184 909 aa24.41■■□□□ 1.5
IRF3-227ENST00000600911 TRAPPC3O43617 180 aa24.41■■□□□ 1.5
IRF3-227ENST00000600911 OAZ2O95190 189 aa24.41■■□□□ 1.5
IRF3-227ENST00000600911 CCDC130P13994 396 aa24.41■■□□□ 1.5
IRF3-227ENST00000600911 PAX3P23760 479 aa24.41■■□□□ 1.5
IRF3-227ENST00000600911 CRYBG2Q8N1P7 616 aa24.41■■□□□ 1.5
IRF3-227ENST00000600911 ZNF606Q8WXB4 792 aa24.41■■□□□ 1.5
IRF3-227ENST00000600911 SYT15Q9BQS2 421 aa24.41■■□□□ 1.5
IRF3-227ENST00000600911 TTPALQ9BTX7 342 aa24.41■■□□□ 1.5
IRF3-227ENST00000600911 HERC2P3Q9BVR0 1158 aa24.41■■□□□ 1.5
IRF3-227ENST00000600911 NHEJ1Q9H9Q4 299 aaPredicted RBP24.41■■□□□ 1.5
IRF3-227ENST00000600911 CERS4Q9HA82 394 aa24.41■■□□□ 1.5
IRF3-227ENST00000600911 PUF60Q9UHX1 559 aaKnown RBP24.41■■□□□ 1.5
IRF3-227ENST00000600911 DDX3XO00571 662 aaKnown RBP eCLIP24.4■■□□□ 1.5
IRF3-227ENST00000600911 ZNF263O14978 683 aa24.4■■□□□ 1.5
IRF3-227ENST00000600911 THAP12O43422 761 aa24.4■■□□□ 1.5
IRF3-227ENST00000600911 TBC1D4O60343 1298 aa24.4■■□□□ 1.5
IRF3-227ENST00000600911 CSPG5O95196 566 aa24.4■■□□□ 1.5
IRF3-227ENST00000600911 SOD2P04179 222 aa24.4■■□□□ 1.5
IRF3-227ENST00000600911 PAEPP09466 180 aa24.4■■□□□ 1.5
IRF3-227ENST00000600911 FAM163BP0C2L3 166 aa24.4■■□□□ 1.5
IRF3-227ENST00000600911 CD19P15391 556 aa24.4■■□□□ 1.5
IRF3-227ENST00000600911 RPL17P18621 184 aaKnown RBP24.4■■□□□ 1.5
IRF3-227ENST00000600911 LHX1P48742 406 aa24.4■■□□□ 1.5
IRF3-227ENST00000600911 MLLT1Q03111 559 aaPredicted RBP24.4■■□□□ 1.5
IRF3-227ENST00000600911 PPP1R26Q5T8A7 1209 aaPredicted RBP24.4■■□□□ 1.5
IRF3-227ENST00000600911 DDX53Q86TM3 631 aaKnown RBP24.4■■□□□ 1.5
IRF3-227ENST00000600911 B3GALNT2Q8NCR0 500 aa24.4■■□□□ 1.5
IRF3-227ENST00000600911 HEXIM2Q96MH2 286 aaKnown RBP24.4■■□□□ 1.5
IRF3-227ENST00000600911 AGPAT1Q99943 283 aa24.4■■□□□ 1.5
IRF3-227ENST00000600911 SPTLC3Q9NUV7 552 aa24.4■■□□□ 1.5
IRF3-227ENST00000600911 DSEQ9UL01 958 aa24.4■■□□□ 1.5
IRF3-227ENST00000600911 C2CD2LO14523 706 aa24.39■■□□□ 1.5
IRF3-227ENST00000600911 PTPN1P18031 435 aaKnown RBP24.39■■□□□ 1.5
IRF3-227ENST00000600911 PDE6CP51160 858 aa24.39■■□□□ 1.5
IRF3-227ENST00000600911 CDK17Q00537 523 aa24.39■■□□□ 1.5
IRF3-227ENST00000600911 PLCB3Q01970 1234 aa24.39■■□□□ 1.5
IRF3-227ENST00000600911 MAPK8IP2Q13387 824 aaPredicted RBP24.39■■□□□ 1.5
IRF3-227ENST00000600911 PAQR9Q6ZVX9 377 aa24.39■■□□□ 1.5
IRF3-227ENST00000600911 METTL23Q86XA0 190 aa24.39■■□□□ 1.5
IRF3-227ENST00000600911 GLYCTKQ8IVS8 523 aa24.39■■□□□ 1.5
IRF3-227ENST00000600911 VPS52Q8N1B4 723 aa24.39■■□□□ 1.5
IRF3-227ENST00000600911 RHOBTB2Q9BYZ6 727 aa24.39■■□□□ 1.5
IRF3-227ENST00000600911 FAM124BQ9H5Z6 455 aaPredicted RBP24.39■■□□□ 1.5
IRF3-227ENST00000600911 AAASQ9NRG9 546 aa24.39■■□□□ 1.5
IRF3-227ENST00000600911 GTF3C4Q9UKN8 822 aa24.39■■□□□ 1.5
IRF3-227ENST00000600911 PCDHGC5Q9Y5F6 944 aa24.39■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms