RNA–Protein interactions for RNA: ENST00000600872.5

FKRP-223, Transcript of fukutin related protein, human

TSL 4

Gene FKRP, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FKRP-223	ENST00000600872	VIT	Q6UXI7	678 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	STXBP4	Q6ZWJ1	553 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	NELFCD	Q8IXH7	590 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	C12orf56	Q8IXR9	622 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	ZNF687	Q8N1G0	1237 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	KIAA0895	Q8NCT3	520 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	PJA1	Q8NG27	643 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	CACTIN	Q8WUQ7	758 aa	Known RBP	13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	SMARCD2	Q92925	531 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	ZNF560	Q96MR9	790 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	LRRC3B	Q96PB8	259 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	LPIN3	Q9BQK8	851 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	SLC39A2	Q9NP94	309 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	FAM13B	Q9NYF5	915 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	MTF2	Q9Y483	593 aa	Predicted RBP	13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	ASB3	Q9Y575	518 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872	NME7	Q9Y5B8	376 aa		13.75	□□□□□ -0.21
FKRP-223	ENST00000600872		A0A1B0GVL5	298 aa		13.74	□□□□□ -0.21
FKRP-223	ENST00000600872		A0A1W2PRU2	124 aa		13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	CST3	P01034	146 aa	Predicted RBP	13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	DCN	P07585	359 aa	Known RBP	13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	HAPLN1	P10915	354 aa	Predicted RBP	13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	HMGA1	P17096	107 aa	Known RBP	13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	ALDH1A3	P47895	512 aa		13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	EPHB3	P54753	998 aa		13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	PLD1	Q13393	1074 aa		13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	MLF2	Q15773	248 aa	Predicted RBP	13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	SNRNP35	Q16560	246 aa	Known RBP	13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	SOWAHA	Q2M3V2	549 aa		13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	TMEM150A	Q86TG1	271 aa		13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	ELMOD1	Q8N336	334 aa		13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	PLEKHO2	Q8TD55	490 aa		13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	TMEM174	Q8WUU8	243 aa		13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	KBTBD7	Q8WVZ9	684 aa		13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	ZNF516	Q92618	1163 aa		13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	ZFP14	Q9HCL3	533 aa		13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	FAM186A	A6NE01	2351 aa		13.74	□□□□□ -0.21
FKRP-223	ENST00000600872	WDR87	Q6ZQQ6	2873 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	ZFP91-CNTF	A0A0A6YYC7	529 aa	Predicted RBP	13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	CD72	P21854	359 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	NBL1	P41271	181 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	VIPR2	P41587	438 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	SNRPF	P62306	86 aa	Known RBP	13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	RBP5	P82980	135 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	PRKCQ	Q04759	706 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	CYP24A1	Q07973	514 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	SMARCB1	Q12824	385 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	BFSP1	Q12934	665 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	GRM2	Q14416	872 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	PSMD6	Q15008	389 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	KNOP1	Q1ED39	458 aa	Known RBP	13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	METTL23	Q86XA0	190 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	WDR49	Q8IV35	697 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	MAML2	Q8IZL2	1156 aa	Predicted RBP	13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	THEM5	Q8N1Q8	247 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	TMEM86A	Q8N2M4	240 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	TOP6BL	Q8N6T0	577 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	ZSCAN18	Q8TBC5	510 aa	Predicted RBP	13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	SPATA18	Q8TC71	538 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	SPPL2B	Q8TCT7	592 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	C2orf15	Q8WU43	125 aa	Known RBP	13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	ATOH1	Q92858	354 aa	Predicted RBP	13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	ACBD6	Q9BR61	282 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	KCTD10	Q9H3F6	313 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	KIAA1586	Q9HCI6	787 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	DMAC2	Q9NW81	257 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	DDX43	Q9NXZ2	648 aa	Known RBP	13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	SIT1	Q9Y3P8	196 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	SNX9	Q9Y5X1	595 aa		13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	PTPRZ1	P23471	2315 aa	Predicted RBP	13.73	□□□□□ -0.21
FKRP-223	ENST00000600872	ZNF638	Q14966	1978 aa	Known RBP	13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	KANSL1L	A0AUZ9	987 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	TMEM191B	P0C7N4	346 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	ACAT1	P24752	427 aa	Known RBP	13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	LMO2	P25791	158 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	TUFM	P49411	452 aa	Known RBP	13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	GPR15	P49685	360 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	NDUFA8	P51970	172 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	PFKP	Q01813	784 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	ANGPT1	Q15389	498 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	SURF1	Q15526	300 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	DUOXA2	Q1HG44	320 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	MGAT5B	Q3V5L5	792 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	KMT5B	Q4FZB7	885 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	INTS6L	Q5JSJ4	861 aa	Known RBP	13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	FAM171B	Q6P995	826 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	TRAPPC11	Q7Z392	1133 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	MFSD6L	Q8IWD5	586 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	XXYLT1	Q8NBI6	393 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	RDH13	Q8NBN7	331 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	STKLD1	Q8NE28	680 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	NOC3L	Q8WTT2	800 aa	Known RBP	13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	ANKRD36BP1	Q96IX9	119 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	SPATA32	Q96LK8	384 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	CGRRF1	Q99675	332 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	SEPT5	Q99719	369 aa	Predicted RBP	13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	OSBPL6	Q9BZF3	934 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	GPR88	Q9GZN0	384 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	IRF2BPL	Q9H1B7	796 aa		13.72	□□□□□ -0.21
FKRP-223	ENST00000600872	GOLPH3L	Q9H4A5	285 aa		13.72	□□□□□ -0.21

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