RNA–Protein interactions for RNA: ENST00000600659.2

RPS28-203, Transcript of ribosomal protein S28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPS28, Length 1,326 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-203ENST00000600659 DUSP9Q99956 384 aaKnown RBP16.9■□□□□ 0.3
RPS28-203ENST00000600659 ACBD6Q9BR61 282 aa16.9■□□□□ 0.3
RPS28-203ENST00000600659 MRPL45Q9BRJ2 306 aaKnown RBP16.9■□□□□ 0.3
RPS28-203ENST00000600659 HSFX1Q9UBD0 423 aa16.9■□□□□ 0.3
RPS28-203ENST00000600659 POLIQ9UNA4 740 aa16.9■□□□□ 0.3
RPS28-203ENST00000600659 SLC27A5Q9Y2P5 690 aa16.9■□□□□ 0.3
RPS28-203ENST00000600659 LRRN2O75325 713 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 TACC1O75410 805 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 LRG1P02750 347 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 ATF6P18850 670 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 FSHRP23945 695 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 RPL13P26373 211 aaKnown RBP16.89■□□□□ 0.29
RPS28-203ENST00000600659 ATICP31939 592 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 PSMC2P35998 433 aaKnown RBP16.89■□□□□ 0.29
RPS28-203ENST00000600659 LRRC63Q05C16 580 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 NCOA4Q13772 614 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 CAMK4Q16566 473 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 PABPC1LQ4VXU2 614 aaKnown RBP16.89■□□□□ 0.29
RPS28-203ENST00000600659 TTI2Q6NXR4 508 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 HS6ST3Q8IZP7 471 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 THEM5Q8N1Q8 247 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 PLCD3Q8N3E9 789 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 ACSF2Q96CM8 615 aaPredicted RBP16.89■□□□□ 0.29
RPS28-203ENST00000600659 TCEAL4Q96EI5 215 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 GTPBP4Q9BZE4 634 aaKnown RBP16.89■□□□□ 0.29
RPS28-203ENST00000600659 KIAA1468Q9P260 1216 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 LIMD1Q9UGP4 676 aa16.89■□□□□ 0.29
RPS28-203ENST00000600659 ZNF638Q14966 1978 aaKnown RBP16.88■□□□□ 0.29
RPS28-203ENST00000600659 NUP210Q8TEM1 1887 aaPredicted RBP16.88■□□□□ 0.29
RPS28-203ENST00000600659 ZNF318Q5VUA4 2279 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 LHX1P48742 406 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 BIRC3Q13489 604 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 WDR72Q3MJ13 1102 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 FAM171BQ6P995 826 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 FOXR2Q6PJQ5 311 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 NPAS3Q8IXF0 933 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 SPPL2BQ8TCT7 592 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 FGF13Q92913 245 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 SYAP1Q96A49 352 aaPredicted RBP16.88■□□□□ 0.29
RPS28-203ENST00000600659 DHTKD1Q96HY7 919 aaPredicted RBP16.88■□□□□ 0.29
RPS28-203ENST00000600659 MED15Q96RN5 788 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 SDCBP2Q9H190 292 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 CLSTN2Q9H4D0 955 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 SMYD3Q9H7B4 428 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 CRTAC1Q9NQ79 661 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 CDH7Q9ULB5 785 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 ANAPC1Q9H1A4 1944 aa16.88■□□□□ 0.29
RPS28-203ENST00000600659 MYBPHLA2RUH7 354 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 FAM86C2PA6NEL3 165 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 ANHXE9PGG2 379 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 CETN3O15182 167 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 SLC16A3O15427 465 aaKnown RBP16.87■□□□□ 0.29
RPS28-203ENST00000600659 ATP2C2O75185 946 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 ASS1P00966 412 aaKnown RBP16.87■□□□□ 0.29
RPS28-203ENST00000600659 HLA-DRAP01903 254 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 HAPLN1P10915 354 aaPredicted RBP16.87■□□□□ 0.29
RPS28-203ENST00000600659 LAMP2P13473 410 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 ALADP13716 330 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 CEBPBP17676 345 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 PTPN2P17706 415 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 GBP2P32456 591 aaPredicted RBP16.87■□□□□ 0.29
RPS28-203ENST00000600659 GCLMP48507 274 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 ZXDAP98168 799 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 FKBP3Q00688 224 aaKnown RBP16.87■□□□□ 0.29
RPS28-203ENST00000600659 MYL7Q01449 175 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 SMARCB1Q12824 385 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 TRPC3Q13507 836 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 ZNF699Q32M78 642 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 SPOPLQ6IQ16 392 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 TRIML1Q8N9V2 468 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 TAS1R2Q8TE23 839 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 C2orf15Q8WU43 125 aaKnown RBP16.87■□□□□ 0.29
RPS28-203ENST00000600659 RSAD2Q8WXG1 361 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 EDAQ92838 391 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 CORO1BQ9BR76 489 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 KCNK12Q9HB15 430 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 APOBEC3GQ9HC16 384 aaKnown RBP16.87■□□□□ 0.29
RPS28-203ENST00000600659 ZNF334Q9HCZ1 680 aaPredicted RBP16.87■□□□□ 0.29
RPS28-203ENST00000600659 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.87■□□□□ 0.297e-6■■■■□ 20.5
RPS28-203ENST00000600659 GTF3C4Q9UKN8 822 aa16.87■□□□□ 0.29
RPS28-203ENST00000600659 PSMA7O14818 248 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 FAM163BP0C2L3 166 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 ASPAP45381 313 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 RAP1GAPP47736 663 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 GPR15P49685 360 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 PSMC1P62191 440 aaKnown RBP16.86■□□□□ 0.29
RPS28-203ENST00000600659 TSPY1Q01534 308 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 HTR4Q13639 388 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 DCP1BQ8IZD4 617 aaKnown RBP16.86■□□□□ 0.29
RPS28-203ENST00000600659 GPT2Q8TD30 523 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 NELFBQ8WX92 580 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 ING5Q8WYH8 240 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 PSMG2Q969U7 264 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 ASIC4Q96FT7 647 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 TSG101Q99816 390 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 LPIN3Q9BQK8 851 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 SYT15Q9BQS2 421 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 DPEP3Q9H4B8 488 aa16.86■□□□□ 0.29
RPS28-203ENST00000600659 ABI2Q9NYB9 513 aaPredicted RBP16.86■□□□□ 0.29
RPS28-203ENST00000600659 NXF1Q9UBU9 619 aaKnown RBP16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms