RNA–Protein interactions for RNA: ENST00000596378.1

SRRM1-222, Transcript of serine and arginine repetitive matrix 1, humanhuman

TSL 1 (best)

Gene SRRM1, Length 2,314 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM1-222ENST00000596378 INSRRP14616 1297 aa23.99■■□□□ 1.43
SRRM1-222ENST00000596378 ETS1P14921 441 aa23.99■■□□□ 1.43
SRRM1-222ENST00000596378 EIF4BP23588 611 aaKnown RBP23.99■■□□□ 1.43
SRRM1-222ENST00000596378 CDR1P51861 262 aa23.99■■□□□ 1.43
SRRM1-222ENST00000596378 P3H1Q32P28 736 aa23.99■■□□□ 1.43
SRRM1-222ENST00000596378 SPOCD1Q6ZMY3 1216 aa23.99■■□□□ 1.43
SRRM1-222ENST00000596378 ARMCX2Q7L311 632 aa23.99■■□□□ 1.43
SRRM1-222ENST00000596378 IPO4Q8TEX9 1081 aaKnown RBP23.99■■□□□ 1.43
SRRM1-222ENST00000596378 RBM41Q96IZ5 413 aaKnown RBP23.99■■□□□ 1.43
SRRM1-222ENST00000596378 SMYD3Q9H7B4 428 aa23.99■■□□□ 1.43
SRRM1-222ENST00000596378 A0A087WZ62 844 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 LACTBL1A8MY62 500 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 CREB1P16220 341 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 CDH5P33151 784 aaPredicted RBP23.98■■□□□ 1.43
SRRM1-222ENST00000596378 SF3A3Q12874 501 aaKnown RBP eCLIP23.98■■□□□ 1.432e-7■■□□□ 13.1
SRRM1-222ENST00000596378 CCDC89Q8N998 374 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 JOSD2Q8TAC2 188 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 TWNKQ96RR1 684 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 FDXACB1Q9BRP7 624 aaPredicted RBP23.98■■□□□ 1.43
SRRM1-222ENST00000596378 TNFSF13BQ9Y275 285 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 LRRD1A4D1F6 860 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 RFC1P35251 1148 aaPredicted RBP23.98■■□□□ 1.43
SRRM1-222ENST00000596378 SLC26A2P50443 739 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 ARHGAP1Q07960 439 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 RNF187Q5TA31 235 aaPredicted RBP23.98■■□□□ 1.43
SRRM1-222ENST00000596378 JADE1Q6IE81 842 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 EXOC3L1Q86VI1 746 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 OTUD6BQ8N6M0 293 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 C3orf20Q8ND61 904 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 PPM1EQ8WY54 764 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 C9orf72Q96LT7 481 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 ZNF518BQ9C0D4 1074 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 MROH8Q9H579 483 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 ERAP1Q9NZ08 941 aa23.98■■□□□ 1.43
SRRM1-222ENST00000596378 ITGB3P05106 788 aa23.97■■□□□ 1.43
SRRM1-222ENST00000596378 STAG3L1P0CL83 205 aa23.97■■□□□ 1.43
SRRM1-222ENST00000596378 DRD4P21917 467 aa23.97■■□□□ 1.43
SRRM1-222ENST00000596378 SMTNL2Q2TAL5 461 aa23.97■■□□□ 1.43
SRRM1-222ENST00000596378 ZNF667Q5HYK9 610 aa23.97■■□□□ 1.43
SRRM1-222ENST00000596378 MFSD5Q6N075 450 aa23.97■■□□□ 1.43
SRRM1-222ENST00000596378 MICALCLQ6ZW33 695 aa23.97■■□□□ 1.43
SRRM1-222ENST00000596378 SPATS2Q86XZ4 545 aaKnown RBP23.97■■□□□ 1.43
SRRM1-222ENST00000596378 SEC16BQ96JE7 1060 aa23.97■■□□□ 1.43
SRRM1-222ENST00000596378 ZNF148Q9UQR1 794 aa23.97■■□□□ 1.43
SRRM1-222ENST00000596378 CEP83Q9Y592 693 aa23.97■■□□□ 1.43
SRRM1-222ENST00000596378 VTNP04004 478 aa23.96■■□□□ 1.43
SRRM1-222ENST00000596378 ZNF286BP0CG31 522 aa23.96■■□□□ 1.43
SRRM1-222ENST00000596378 CETN2P41208 172 aa23.96■■□□□ 1.43
SRRM1-222ENST00000596378 RAD23BP54727 409 aa23.96■■□□□ 1.43
SRRM1-222ENST00000596378 CAV1Q03135 178 aa23.96■■□□□ 1.43
SRRM1-222ENST00000596378 CPLX4Q7Z7G2 160 aa23.96■■□□□ 1.43
SRRM1-222ENST00000596378 CROCCP2Q86T23 111 aa23.96■■□□□ 1.43
SRRM1-222ENST00000596378 PACS2Q86VP3 889 aa23.96■■□□□ 1.43
SRRM1-222ENST00000596378 CENPTQ96BT3 561 aa23.96■■□□□ 1.43
SRRM1-222ENST00000596378 PRMT1Q99873 361 aaKnown RBP23.96■■□□□ 1.43
SRRM1-222ENST00000596378 LGALS2P05162 132 aa23.96■■□□□ 1.43
SRRM1-222ENST00000596378 IFNAR2P48551 515 aa23.96■■□□□ 1.43
SRRM1-222ENST00000596378 C6orf89Q6UWU4 347 aa23.96■■□□□ 1.43
SRRM1-222ENST00000596378 FASTKD5Q7L8L6 764 aaKnown RBP23.96■■□□□ 1.43
SRRM1-222ENST00000596378 EMC1Q8N766 993 aa23.96■■□□□ 1.43
SRRM1-222ENST00000596378 CHMP6Q96FZ7 201 aa23.96■■□□□ 1.43
SRRM1-222ENST00000596378 ROPN1BQ9BZX4 212 aaPredicted RBP23.96■■□□□ 1.43
SRRM1-222ENST00000596378 ROPN1Q9HAT0 212 aaPredicted RBP23.96■■□□□ 1.43
SRRM1-222ENST00000596378 INTS9Q9NV88 658 aaKnown RBP23.96■■□□□ 1.43
SRRM1-222ENST00000596378 hCG_1818297A0A087WSY0 165 aa23.95■■□□□ 1.43
SRRM1-222ENST00000596378 C5orf60A6NFR6 353 aa23.95■■□□□ 1.43
SRRM1-222ENST00000596378 TJP3O95049 919 aa23.95■■□□□ 1.43
SRRM1-222ENST00000596378 PIGHQ14442 188 aaPredicted RBP23.95■■□□□ 1.43
SRRM1-222ENST00000596378 KCNT1Q5JUK3 1230 aa23.95■■□□□ 1.43
SRRM1-222ENST00000596378 CPXM1Q96SM3 734 aa23.95■■□□□ 1.43
SRRM1-222ENST00000596378 ZWILCHQ9H900 591 aa23.95■■□□□ 1.43
SRRM1-222ENST00000596378 AKT3Q9Y243 479 aa23.95■■□□□ 1.43
SRRM1-222ENST00000596378 ATXN2Q99700 1313 aaKnown RBP23.95■■□□□ 1.42
SRRM1-222ENST00000596378 CETPP11597 493 aa23.95■■□□□ 1.42
SRRM1-222ENST00000596378 PSMA2P25787 234 aa23.95■■□□□ 1.42
SRRM1-222ENST00000596378 AMHR2Q16671 573 aa23.95■■□□□ 1.42
SRRM1-222ENST00000596378 HIBCHQ6NVY1 386 aaPredicted RBP23.95■■□□□ 1.42
SRRM1-222ENST00000596378 ARFGAP1Q8N6T3 406 aa23.95■■□□□ 1.42
SRRM1-222ENST00000596378 ZNF317Q96PQ6 595 aaPredicted RBP23.95■■□□□ 1.42
SRRM1-222ENST00000596378 BCO2Q9BYV7 579 aa23.95■■□□□ 1.42
SRRM1-222ENST00000596378 STMN4Q9H169 189 aaPredicted RBP23.95■■□□□ 1.42
SRRM1-222ENST00000596378 SAE1Q9UBE0 346 aaPredicted RBP23.95■■□□□ 1.42
SRRM1-222ENST00000596378 IL18RAPO95256 599 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 CDKN2BP42772 138 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 DYNLT1P63172 113 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 LRRC38Q5VT99 294 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 KIAA0319LQ8IZA0 1049 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 ARHGEF2Q92974 986 aaKnown RBP23.94■■□□□ 1.42
SRRM1-222ENST00000596378 PDZD7Q9H5P4 517 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 PRMT7Q9NVM4 692 aaPredicted RBP23.94■■□□□ 1.42
SRRM1-222ENST00000596378 KRT3P12035 628 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 IL1R2P27930 398 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 PHKA2P46019 1235 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 ARSEP51690 589 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 PSMC1P62191 440 aaKnown RBP23.94■■□□□ 1.42
SRRM1-222ENST00000596378 YWHAEP62258 255 aaKnown RBP23.94■■□□□ 1.42
SRRM1-222ENST00000596378 LRRC14Q15048 493 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 TFDP3Q5H9I0 405 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 TAPT1Q6NXT6 567 aa23.94■■□□□ 1.42
SRRM1-222ENST00000596378 SLC4A11Q8NBS3 891 aa23.94■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms