RNA–Protein interactions for RNA: ENST00000591548.5

TUBD1-211, Transcript of tubulin delta 1, humanhuman

TSL 1 (best)

Gene TUBD1, Length 1,577 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBD1-211ENST00000591548 ACOT1Q86TX2 421 aa12.1□□□□□ -0.47
TUBD1-211ENST00000591548 MCOLN2Q8IZK6 566 aa12.1□□□□□ -0.47
TUBD1-211ENST00000591548 C12orf29Q8N999 325 aa12.1□□□□□ -0.47
TUBD1-211ENST00000591548 TPCN2Q8NHX9 752 aa12.1□□□□□ -0.47
TUBD1-211ENST00000591548 TRIM43Q96BQ3 446 aaPredicted RBP12.1□□□□□ -0.47
TUBD1-211ENST00000591548 DDX27Q96GQ7 796 aaKnown RBP12.1□□□□□ -0.47
TUBD1-211ENST00000591548 SENP8Q96LD8 212 aa12.1□□□□□ -0.47
TUBD1-211ENST00000591548 NAPGQ99747 312 aaPredicted RBP12.1□□□□□ -0.47
TUBD1-211ENST00000591548 DPEP3Q9H4B8 488 aa12.1□□□□□ -0.47
TUBD1-211ENST00000591548 TBC1D13Q9NVG8 400 aa12.1□□□□□ -0.47
TUBD1-211ENST00000591548 CHORDC1Q9UHD1 332 aaPredicted RBP12.1□□□□□ -0.47
TUBD1-211ENST00000591548 KIAA1257Q9ULG3 409 aa12.1□□□□□ -0.47
TUBD1-211ENST00000591548 PCDHB7Q9Y5E2 793 aa12.1□□□□□ -0.47
TUBD1-211ENST00000591548 TDRD15B5MCY1 1934 aaKnown RBP12.1□□□□□ -0.47
TUBD1-211ENST00000591548 A8MXQ7 604 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 F8W810 466 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 ATP1A1P05023 1023 aaKnown RBP12.09□□□□□ -0.47
TUBD1-211ENST00000591548 PDGFRBP09619 1106 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 WARSP23381 471 aaKnown RBP12.09□□□□□ -0.47
TUBD1-211ENST00000591548 GATMP50440 423 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 PTP4A2Q12974 167 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 CNGA2Q16280 664 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 PAN2Q504Q3 1202 aaKnown RBP12.09□□□□□ -0.47
TUBD1-211ENST00000591548 TIGD5Q53EQ6 642 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 SGO2Q562F6 1265 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 WSCD1Q658N2 575 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 UBE2Q1Q7Z7E8 422 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 OSTM1Q86WC4 334 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 PHF13Q86YI8 300 aaPredicted RBP12.09□□□□□ -0.47
TUBD1-211ENST00000591548 ADGRF2Q8IZF7 708 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 CRYBG2Q8N1P7 616 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 LRRC57Q8N9N7 239 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 TMEM35BQ8NCS4 154 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 C1orf131Q8NDD1 294 aaKnown RBP12.09□□□□□ -0.47
TUBD1-211ENST00000591548 URGCPQ8TCY9 931 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 ZNF653Q96CK0 615 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 UROC1Q96N76 676 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 CASD1Q96PB1 797 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 ALS2CR12Q96Q35 445 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 LPIN3Q9BQK8 851 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 ZNF518BQ9C0D4 1074 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 LHX5Q9H2C1 402 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 SNX25Q9H3E2 840 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 PRDM10Q9NQV6 1147 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 KANSL3Q9P2N6 904 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 CYTH4Q9UIA0 394 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 GTF3C4Q9UKN8 822 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.09□□□□□ -0.47
TUBD1-211ENST00000591548 STXBP5LQ9Y2K9 1186 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 GABRDO14764 452 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 KIAA0355O15063 1070 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 URI1O94763 535 aaPredicted RBP12.09□□□□□ -0.47
TUBD1-211ENST00000591548 B3GAT3O94766 335 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 MICAL2O94851 1124 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 TIMP1P01033 207 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 ITGB1P05556 798 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 FAM163BP0C2L3 166 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 EN2P19622 333 aaPredicted RBP12.09□□□□□ -0.47
TUBD1-211ENST00000591548 MMP8P22894 467 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 RRM1P23921 792 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 RFC2P35250 354 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 HADHBP55084 474 aaKnown RBP12.09□□□□□ -0.47
TUBD1-211ENST00000591548 LLGL2Q6P1M3 1020 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 DCLRE1AQ6PJP8 1040 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 LCLAT1Q6UWP7 414 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 MMS22LQ6ZRQ5 1243 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 RHOT2Q8IXI1 618 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 COLGALT2Q8IYK4 626 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 VCPIP1Q96JH7 1222 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 C11orf70Q9BRQ4 267 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 GOLPH3Q9H4A6 298 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 L2HGDHQ9H9P8 463 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 ADAM22Q9P0K1 906 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 CTTNBP2NLQ9P2B4 639 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 PCDH10Q9P2E7 1040 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 CNOT8Q9UFF9 292 aaKnown RBP12.09□□□□□ -0.47
TUBD1-211ENST00000591548 JRKLQ9Y4A0 524 aa12.09□□□□□ -0.47
TUBD1-211ENST00000591548 TIMM13Q9Y5L4 95 aaPredicted RBP12.09□□□□□ -0.47
TUBD1-211ENST00000591548 TTC3P53804 2025 aa12.08□□□□□ -0.48
TUBD1-211ENST00000591548 I3L4J1 428 aa12.08□□□□□ -0.48
TUBD1-211ENST00000591548 RIOK3O14730 519 aaKnown RBP12.08□□□□□ -0.48
TUBD1-211ENST00000591548 BUB1BO60566 1050 aaPredicted RBP12.08□□□□□ -0.48
TUBD1-211ENST00000591548 MTA2O94776 668 aa12.08□□□□□ -0.48
TUBD1-211ENST00000591548 KIF4AO95239 1232 aa12.08□□□□□ -0.48
TUBD1-211ENST00000591548 GPD2P43304 727 aa12.08□□□□□ -0.48
TUBD1-211ENST00000591548 BRCC3P46736 316 aa12.08□□□□□ -0.48
TUBD1-211ENST00000591548 AMPD2Q01433 879 aa12.08□□□□□ -0.48
TUBD1-211ENST00000591548 IFI16Q16666 785 aaKnown RBP12.08□□□□□ -0.48
TUBD1-211ENST00000591548 PPP1R26Q5T8A7 1209 aaPredicted RBP12.08□□□□□ -0.48
TUBD1-211ENST00000591548 PAPD7Q5XG87 772 aaKnown RBP12.08□□□□□ -0.48
TUBD1-211ENST00000591548 PPP1R2P3Q6NXS1 205 aa12.08□□□□□ -0.48
TUBD1-211ENST00000591548 CNKSR3Q6P9H4 555 aa12.08□□□□□ -0.48
TUBD1-211ENST00000591548 DSTYKQ6XUX3 929 aa12.08□□□□□ -0.48
TUBD1-211ENST00000591548 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.08□□□□□ -0.48
TUBD1-211ENST00000591548 SLFN11Q7Z7L1 901 aa12.08□□□□□ -0.48
TUBD1-211ENST00000591548 PHLDB2Q86SQ0 1253 aa12.08□□□□□ -0.48
TUBD1-211ENST00000591548 HASPINQ8TF76 798 aa12.08□□□□□ -0.48
TUBD1-211ENST00000591548 NUP85Q9BW27 656 aa12.08□□□□□ -0.48
TUBD1-211ENST00000591548 AVENQ9NQS1 362 aaPredicted RBP12.08□□□□□ -0.48
TUBD1-211ENST00000591548 PRDM5Q9NQX1 630 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms