RNA–Protein interactions for RNA: ENST00000590887.5

PTBP1-216, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 642 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-216ENST00000590887 THAP2Q9H0W7 228 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 SYNCQ9H7C4 482 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 PARVAQ9NVD7 372 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 RNF14Q9UBS8 474 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 TRIM10Q9UDY6 481 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 CNOT8Q9UFF9 292 aaKnown RBP13.79□□□□□ -0.2
PTBP1-216ENST00000590887 AMFRQ9UKV5 643 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 TBX21Q9UL17 535 aa13.79□□□□□ -0.2
PTBP1-216ENST00000590887 TANC1Q9C0D5 1861 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 SCN1AP35498 2009 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 ABHD14A-ACY1A0A1B0GW23 586 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 BUB1O43683 1085 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 B3GAT3O94766 335 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 MTA2O94776 668 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 TIMP1P01033 207 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 BRD2P25440 801 aaKnown RBP13.78□□□□□ -0.2
PTBP1-216ENST00000590887 CLCNKBP51801 687 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 CCL23P55773 120 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 SOX4Q06945 474 aaPredicted RBP13.78□□□□□ -0.2
PTBP1-216ENST00000590887 SOWAHAQ2M3V2 549 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 ARHGAP17Q68EM7 881 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 LCLAT1Q6UWP7 414 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 DAAM2Q86T65 1068 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 RTN4RL1Q86UN2 441 aaPredicted RBP13.78□□□□□ -0.2
PTBP1-216ENST00000590887 CEP112Q8N8E3 955 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 MNS1Q8NEH6 495 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 CPA5Q8WXQ8 436 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 SENP8Q96LD8 212 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 WDR24Q96S15 920 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 SELENOOQ9BVL4 669 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 PACSIN1Q9BY11 444 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 IRX2Q9BZI1 471 aaPredicted RBP13.78□□□□□ -0.2
PTBP1-216ENST00000590887 ELOVL4Q9GZR5 314 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 SDCBP2Q9H190 292 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 ACP6Q9NPH0 428 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 MIOSQ9NXC5 875 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 CDC23Q9UJX2 597 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 STXBP5LQ9Y2K9 1186 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 DUSP10Q9Y6W6 482 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 MYH10P35580 1976 aa13.78□□□□□ -0.2
PTBP1-216ENST00000590887 TMEM189-UBE2V1I3L0A0 370 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 KIAA0355O15063 1070 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 PALMO75781 387 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 ALDH2P05091 517 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 RAG1P15918 1043 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 TYMPP19971 482 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 CYP2C18P33260 490 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 PAFAH1B1P43034 410 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 ELAVL2Q12926 359 aaKnown RBP13.77□□□□□ -0.21
PTBP1-216ENST00000590887 RPS6KA1Q15418 735 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 MAPRE1Q15691 268 aaKnown RBP13.77□□□□□ -0.21
PTBP1-216ENST00000590887 WHAMMP3Q1A5X7 153 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 PAPD7Q5XG87 772 aaKnown RBP13.77□□□□□ -0.21
PTBP1-216ENST00000590887 PEX26Q7Z412 305 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 LIMS2Q7Z4I7 341 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 TPCN2Q8NHX9 752 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 ZNF564Q8TBZ8 553 aaPredicted RBP13.77□□□□□ -0.21
PTBP1-216ENST00000590887 WHAMMQ8TF30 809 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 MRPL45Q9BRJ2 306 aaKnown RBP13.77□□□□□ -0.21
PTBP1-216ENST00000590887 TMEM175Q9BSA9 504 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 PLVAPQ9BX97 442 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 CXCL16Q9H2A7 254 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 GOLGA2P5Q9HBQ8 144 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 CYLDQ9NQC7 956 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 TAS2R14Q9NYV8 317 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 CDH9Q9ULB4 789 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.77□□□□□ -0.21
PTBP1-216ENST00000590887 TFR2Q9UP52 801 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 HYOU1Q9Y4L1 999 aa13.77□□□□□ -0.21
PTBP1-216ENST00000590887 A0A0U1RQJ8 604 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 CASTOR2A6NHX0 329 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 MEIS3P2A8K0S8 358 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 MIF4GDA9UHW6 222 aaKnown RBP13.76□□□□□ -0.21
PTBP1-216ENST00000590887 M0QYV0 167 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 MYO1FO00160 1098 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 PPEF2O14830 753 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 SLU7O95391 586 aaKnown RBP13.76□□□□□ -0.21
PTBP1-216ENST00000590887 ABL1P00519 1130 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 AMHP03971 560 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 MMP8P22894 467 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 SLC1A1P43005 524 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 ACADSBP45954 432 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 AARSP49588 968 aaKnown RBP eCLIP13.76□□□□□ -0.21
PTBP1-216ENST00000590887 ZNF268Q14587 947 aaPredicted RBP13.76□□□□□ -0.21
PTBP1-216ENST00000590887 C11orf63Q6NUN7 778 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 DEFB128Q7Z7B8 93 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 ZDHHC17Q8IUH5 632 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 PDCL2Q8N4E4 241 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 UBL4BQ8N7F7 174 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 DIS3LQ8TF46 1054 aaKnown RBP13.76□□□□□ -0.21
PTBP1-216ENST00000590887 STK32AQ8WU08 396 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 ATRIPQ8WXE1 791 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 C18orf8Q96DM3 657 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 SCLYQ96I15 445 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 PBKQ96KB5 322 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 RPGRIP1Q96KN7 1286 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 NUP85Q9BW27 656 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 OXCT2Q9BYC2 517 aaPredicted RBP13.76□□□□□ -0.21
PTBP1-216ENST00000590887 OSBPL7Q9BZF2 842 aa13.76□□□□□ -0.21
PTBP1-216ENST00000590887 L2HGDHQ9H9P8 463 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms