RNA–Protein interactions for RNA: ENST00000590239.5

DDX39A-211, Transcript of DExD-box helicase 39A, humanhuman

TSL 4

Gene DDX39A, Length 565 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX39A-211ENST00000590239 CCDC42Q96M95 316 aa16.15■□□□□ 0.18
DDX39A-211ENST00000590239 PLVAPQ9BX97 442 aa16.15■□□□□ 0.18
DDX39A-211ENST00000590239 OXCT2Q9BYC2 517 aaPredicted RBP16.15■□□□□ 0.18
DDX39A-211ENST00000590239 DDX43Q9NXZ2 648 aaKnown RBP16.15■□□□□ 0.18
DDX39A-211ENST00000590239 NME7Q9Y5B8 376 aa16.15■□□□□ 0.18
DDX39A-211ENST00000590239 TIMM13Q9Y5L4 95 aaPredicted RBP16.15■□□□□ 0.18
DDX39A-211ENST00000590239 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.14■□□□□ 0.17
DDX39A-211ENST00000590239 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.14■□□□□ 0.17
DDX39A-211ENST00000590239 MED7O43513 233 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 PLEKP08567 350 aaPredicted RBP16.14■□□□□ 0.17
DDX39A-211ENST00000590239 PDGFRBP09619 1106 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 VDRP11473 427 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 LMO2P25791 158 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 GNA15P30679 374 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 BMPR1AP36894 532 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 RABGGTBP53611 331 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 CDR2Q01850 454 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 PLCB3Q01970 1234 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 KRT17Q04695 432 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 MRPL58Q14197 206 aaKnown RBP16.14■□□□□ 0.17
DDX39A-211ENST00000590239 USP41Q3LFD5 358 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 FAM109BQ6ICB4 259 aaPredicted RBP16.14■□□□□ 0.17
DDX39A-211ENST00000590239 ZNF571Q7Z3V5 609 aaPredicted RBP16.14■□□□□ 0.17
DDX39A-211ENST00000590239 ACOT1Q86TX2 421 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 GPIHBP1Q8IV16 184 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 DDX1Q92499 740 aaKnown RBP16.14■□□□□ 0.17
DDX39A-211ENST00000590239 HEXIM2Q96MH2 286 aaKnown RBP16.14■□□□□ 0.17
DDX39A-211ENST00000590239 AGPAT1Q99943 283 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 RTP3Q9BQQ7 232 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 ACBD6Q9BR61 282 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 TTPALQ9BTX7 342 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 KCNF1Q9H3M0 494 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 NHEJ1Q9H9Q4 299 aaPredicted RBP16.14■□□□□ 0.17
DDX39A-211ENST00000590239 CDH9Q9ULB4 789 aa16.14■□□□□ 0.17
DDX39A-211ENST00000590239 LINC01553A4QN01 128 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 GRXCR1A8MXD5 290 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 H7C4K7 107 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 ARHGAP6O43182 974 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 THAP12O43422 761 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 SOD2P04179 222 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 CD19P15391 556 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 CHRNB2P17787 502 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 PTPN1P18031 435 aaKnown RBP16.13■□□□□ 0.17
DDX39A-211ENST00000590239 TNFAIP3P21580 790 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 BMS1Q14692 1282 aaKnown RBP16.13■□□□□ 0.17
DDX39A-211ENST00000590239 STILQ15468 1287 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 ASTE1Q2TB18 679 aaPredicted RBP16.13■□□□□ 0.17
DDX39A-211ENST00000590239 SGO2Q562F6 1265 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 VARS2Q5ST30 1063 aaKnown RBP16.13■□□□□ 0.17
DDX39A-211ENST00000590239 ANKS3Q6ZW76 656 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 GPR65Q8IYL9 337 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 B3GALNT2Q8NCR0 500 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 SLC20A1Q8WUM9 679 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 ZNF606Q8WXB4 792 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 TFAP2BQ92481 460 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 SAMD11Q96NU1 681 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 SYT15Q9BQS2 421 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 HERC2P3Q9BVR0 1158 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 VN1R3Q9BXE9 311 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 DEF6Q9H4E7 631 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 ACP6Q9NPH0 428 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 CHST7Q9NS84 486 aa16.13■□□□□ 0.17
DDX39A-211ENST00000590239 PUF60Q9UHX1 559 aaKnown RBP16.13■□□□□ 0.17
DDX39A-211ENST00000590239 RANBP2P49792 3224 aaKnown RBP16.13■□□□□ 0.17
DDX39A-211ENST00000590239 TSC2P49815 1807 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 SOWAHDA6NJG2 315 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 OR6C75A6NL08 312 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 AKR1B10O60218 316 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 FGF18O76093 207 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 RB1P06400 928 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 BRD2P25440 801 aaKnown RBP16.12■□□□□ 0.17
DDX39A-211ENST00000590239 CYLC1P35663 651 aaPredicted RBP16.12■□□□□ 0.17
DDX39A-211ENST00000590239 ORC1Q13415 861 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 RAB30Q15771 203 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 CNGA2Q16280 664 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 ARHGAP17Q68EM7 881 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 ZNF280DQ6N043 979 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 TRIM72Q6ZMU5 477 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 TAS1R1Q7RTX1 841 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 CEP57Q86XR8 500 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 TDHQ8IZJ6 230 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 SLC30A5Q8TAD4 765 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 PIK3R5Q8WYR1 880 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 TRIM44Q96DX7 344 aaPredicted RBP16.12■□□□□ 0.17
DDX39A-211ENST00000590239 ZNF830Q96NB3 372 aaPredicted RBP16.12■□□□□ 0.17
DDX39A-211ENST00000590239 ZSWIM1Q9BR11 485 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 DPEP3Q9H4B8 488 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 PCDHGC3Q9UN70 934 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 LZTS1Q9Y250 596 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 EPN1Q9Y6I3 576 aaPredicted RBP16.12■□□□□ 0.17
DDX39A-211ENST00000590239 KIAA1671Q9BY89 1806 aa16.12■□□□□ 0.17
DDX39A-211ENST00000590239 C5orf67F2Z3F1 127 aa16.11■□□□□ 0.17
DDX39A-211ENST00000590239 O00370 1275 aa16.11■□□□□ 0.17
DDX39A-211ENST00000590239 HCRTO43612 131 aa16.11■□□□□ 0.17
DDX39A-211ENST00000590239 TBC1D4O60343 1298 aa16.11■□□□□ 0.17
DDX39A-211ENST00000590239 CALCAP01258 141 aa16.11■□□□□ 0.17
DDX39A-211ENST00000590239 CA3P07451 260 aa16.11■□□□□ 0.17
DDX39A-211ENST00000590239 MMEP08473 750 aa16.11■□□□□ 0.17
DDX39A-211ENST00000590239 MYOGP15173 224 aa16.11■□□□□ 0.17
DDX39A-211ENST00000590239 ACAT1P24752 427 aaKnown RBP16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms