RNA–Protein interactions for RNA: ENST00000590180.1

TPM4-212, Transcript of tropomyosin 4, humanhuman

TSL 3

Gene TPM4, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-212ENST00000590180 PDGFRBP09619 1106 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 HAPLN1P10915 354 aaPredicted RBP12.96□□□□□ -0.33
TPM4-212ENST00000590180 RPL13P26373 211 aaKnown RBP12.96□□□□□ -0.33
TPM4-212ENST00000590180 CCR2P41597 374 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 GPC5P78333 572 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 FAM160A1Q05DH4 1040 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 ADAM9Q13443 819 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 SNW1Q13573 536 aaKnown RBP12.96□□□□□ -0.33
TPM4-212ENST00000590180 VEPH1Q14D04 833 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 NFE2Q16621 373 aaPredicted RBP12.96□□□□□ -0.33
TPM4-212ENST00000590180 WDR72Q3MJ13 1102 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 PRSS36Q5K4E3 855 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 ITIH5Q86UX2 942 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 OSTM1Q86WC4 334 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 GUF1Q8N442 669 aaKnown RBP12.96□□□□□ -0.33
TPM4-212ENST00000590180 FLCNQ8NFG4 579 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 ENGASEQ8NFI3 743 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 SPPL2BQ8TCT7 592 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 PLEKHO2Q8TD55 490 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 PARD3BQ8TEW8 1205 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 GIPC2Q8TF65 315 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 KXD1Q9BQD3 176 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 PI4K2AQ9BTU6 479 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 SNX25Q9H3E2 840 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 TMLHEQ9NVH6 421 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 RMND1Q9NWS8 449 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 HSFX1Q9UBD0 423 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 NXF1Q9UBU9 619 aaKnown RBP12.96□□□□□ -0.33
TPM4-212ENST00000590180 GTF3C4Q9UKN8 822 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 CIZ1Q9ULV3 898 aaPredicted RBP12.96□□□□□ -0.33
TPM4-212ENST00000590180 TRAF3IP3Q9Y228 551 aa12.96□□□□□ -0.33
TPM4-212ENST00000590180 LRRIQ3A6PVS8 624 aaPredicted RBP12.95□□□□□ -0.34
TPM4-212ENST00000590180 HCRTO43612 131 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 MICAL2O94851 1124 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 SRFP11831 508 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 RFX1P22670 979 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 LMO2P25791 158 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 PCSK1P29120 753 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 AVPR2P30518 371 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 GNL1P36915 607 aaPredicted RBP12.95□□□□□ -0.34
TPM4-212ENST00000590180 AP3M2P53677 418 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 MYL6P60660 151 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 TNNC1P63316 161 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 TEAD2Q15562 447 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 INTS6LQ5JSJ4 861 aaKnown RBP12.95□□□□□ -0.34
TPM4-212ENST00000590180 SMYD4Q8IYR2 804 aaPredicted RBP12.95□□□□□ -0.34
TPM4-212ENST00000590180 SIX5Q8N196 739 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 OR6B3Q8NGW1 331 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 SPATA18Q8TC71 538 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 GPR152Q8TDT2 470 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 ERCC4Q92889 916 aaPredicted RBP12.95□□□□□ -0.34
TPM4-212ENST00000590180 SMARCE1Q969G3 411 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 TIGD1Q96MW7 591 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 LPIN3Q9BQK8 851 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 DNAJC25Q9H1X3 360 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 ATXN3LQ9H3M9 355 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 SLITRK6Q9H5Y7 841 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 ZFP14Q9HCL3 533 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 WNT16Q9UBV4 365 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 CA14Q9ULX7 337 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 PCDHA5Q9Y5H7 936 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 DENND4AQ7Z401 1863 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 NOTCH4Q99466 2003 aa12.95□□□□□ -0.34
TPM4-212ENST00000590180 A0A1W2PRU2 124 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 MYBPHLA2RUH7 354 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 GABRDO14764 452 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 GADD45BO75293 160 aaPredicted RBP12.94□□□□□ -0.34
TPM4-212ENST00000590180 MOSPD3O75425 235 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 C4BPAP04003 597 aaKnown RBP12.94□□□□□ -0.34
TPM4-212ENST00000590180 NR2F2P24468 414 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 CYP2F1P24903 491 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 ATICP31939 592 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 EPHA5P54756 1037 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 DLG4P78352 724 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 FAM78AQ5JUQ0 283 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 TANGO2Q6ICL3 276 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 POTEHQ6S545 545 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 SPATA2LQ8IUW3 424 aaPredicted RBP12.94□□□□□ -0.34
TPM4-212ENST00000590180 GPIHBP1Q8IV16 184 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 SHKBP1Q8TBC3 707 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 TMC2Q8TDI7 906 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 TMEM174Q8WUU8 243 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 PSMG2Q969U7 264 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 SYAP1Q96A49 352 aaPredicted RBP12.94□□□□□ -0.34
TPM4-212ENST00000590180 ZSWIM3Q96MP5 696 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 GSDMAQ96QA5 445 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 LRRC3Q9BY71 257 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 PLA2G2FQ9BZM2 168 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 GPR88Q9GZN0 384 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 GZF1Q9H116 711 aaPredicted RBP12.94□□□□□ -0.34
TPM4-212ENST00000590180 CHMP5Q9NZZ3 219 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 CDH9Q9ULB4 789 aa12.94□□□□□ -0.34
TPM4-212ENST00000590180 NRG2O14511 850 aaPredicted RBP12.93□□□□□ -0.34
TPM4-212ENST00000590180 KINO60870 393 aaKnown RBP12.93□□□□□ -0.34
TPM4-212ENST00000590180 ATP2C2O75185 946 aa12.93□□□□□ -0.34
TPM4-212ENST00000590180 ECI2O75521 394 aa12.93□□□□□ -0.34
TPM4-212ENST00000590180 FGF19O95750 216 aa12.93□□□□□ -0.34
TPM4-212ENST00000590180 FAM163BP0C2L3 166 aa12.93□□□□□ -0.34
TPM4-212ENST00000590180 KRT13P13646 458 aa12.93□□□□□ -0.34
TPM4-212ENST00000590180 WARSP23381 471 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms