RNA–Protein interactions for RNA: ENST00000589797.5

RETREG3-208, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 2

Gene RETREG3, Length 4,149 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-208ENST00000589797 MROH8Q9H579 483 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 XPNPEP1Q9NQW7 623 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 CICQ96RK0 1608 aaPredicted RBP15.33■□□□□ 0.04
RETREG3-208ENST00000589797 NUP188Q5SRE5 1749 aa15.33■□□□□ 0.04
RETREG3-208ENST00000589797 A0A087WUV0 522 aaPredicted RBP15.32■□□□□ 0.04
RETREG3-208ENST00000589797 NDC80O14777 642 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 PROSCO94903 275 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 ITIH2P19823 946 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 GNL1P36915 607 aaPredicted RBP15.32■□□□□ 0.04
RETREG3-208ENST00000589797 PIGHQ14442 188 aaPredicted RBP15.32■□□□□ 0.04
RETREG3-208ENST00000589797 NAA25Q14CX7 972 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 FBXW10Q5XX13 1052 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 JADE1Q6IE81 842 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 KIAA1841Q6NSI8 718 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 PPP1R2P3Q6NXS1 205 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 FAM71AQ8IYT1 594 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 ZNF473Q8WTR7 871 aaKnown RBP15.32■□□□□ 0.04
RETREG3-208ENST00000589797 SHC3Q92529 594 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 ERVK-5Q9HDB9 667 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 AKAP11Q9UKA4 1901 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 ARHGAP42A6NI28 874 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 NFICP08651 508 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 NDST1P52848 882 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 OTUD4Q01804 1114 aaKnown RBP15.32■□□□□ 0.04
RETREG3-208ENST00000589797 PSMD6Q15008 389 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 COBLL1Q53SF7 1204 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 ABHD15Q6UXT9 468 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 PDZD4Q76G19 769 aaPredicted RBP15.32■□□□□ 0.04
RETREG3-208ENST00000589797 TTC13Q8NBP0 860 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 AENQ8WTP8 325 aaKnown RBP15.32■□□□□ 0.04
RETREG3-208ENST00000589797 PPP1R12CQ9BZL4 782 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 RNPEPQ9H4A4 650 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 COG5Q9UP83 839 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 PRG3Q9Y2Y8 225 aaPredicted RBP15.32■□□□□ 0.04
RETREG3-208ENST00000589797 GNAT1P11488 350 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 PTENP60484 403 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 SDCCAG8Q86SQ7 713 aaPredicted RBP15.32■□□□□ 0.04
RETREG3-208ENST00000589797 DEPDC1BQ8WUY9 529 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 NSMCE1Q8WV22 266 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 CDKL2Q92772 493 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 CDC42EP4Q9H3Q1 356 aaKnown RBP15.32■□□□□ 0.04
RETREG3-208ENST00000589797 SMYD3Q9H7B4 428 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 FGFR1OP2Q9NVK5 253 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 RPS6KA5O75582 802 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 B3GAT3O94766 335 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 PTPN11Q06124 597 aaPredicted RBP15.32■□□□□ 0.04
RETREG3-208ENST00000589797 C12orf29Q8N999 325 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 STMN2Q93045 179 aa15.32■□□□□ 0.04
RETREG3-208ENST00000589797 CXCL11O14625 94 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 DHX15O43143 795 aaKnown RBP15.31■□□□□ 0.04
RETREG3-208ENST00000589797 SYF2O95926 243 aaKnown RBP15.31■□□□□ 0.04
RETREG3-208ENST00000589797 OAZ1P54368 228 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 FAM117BQ6P1L5 589 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 C4orf50Q6ZRC1 276 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 CCHCR1Q8TD31 782 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 CNTNAP1P78357 1384 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 A0A0A6YYK5 440 aaPredicted RBP15.31■□□□□ 0.04
RETREG3-208ENST00000589797 ACKR2O00590 384 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 ACO1P21399 889 aaKnown RBP15.31■□□□□ 0.04
RETREG3-208ENST00000589797 GCNT1Q02742 428 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 RIOX2Q8IUF8 465 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 RXFP2Q8WXD0 754 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 VPS11Q9H270 941 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 XPO7Q9UIA9 1087 aaKnown RBP15.31■□□□□ 0.04
RETREG3-208ENST00000589797 SYNPO2Q9UMS6 1093 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 LGALS2P05162 132 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 RFC1P35251 1148 aaPredicted RBP15.31■□□□□ 0.04
RETREG3-208ENST00000589797 ACTN3Q08043 901 aaPredicted RBP15.31■□□□□ 0.04
RETREG3-208ENST00000589797 GRIK4Q16099 956 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 ZACNQ401N2 412 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 LBX2Q6XYB7 198 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 PLEKHH3Q7Z736 793 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 ADAM32Q8TC27 787 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 LENG1Q96BZ8 264 aaPredicted RBP15.31■□□□□ 0.04
RETREG3-208ENST00000589797 L3MBTL3Q96JM7 780 aaPredicted RBP15.31■□□□□ 0.04
RETREG3-208ENST00000589797 MBOAT7Q96N66 472 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 MARCOQ9UEW3 520 aaPredicted RBP15.31■□□□□ 0.04
RETREG3-208ENST00000589797 DNPEPQ9ULA0 475 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 IRS2Q9Y4H2 1338 aa15.31■□□□□ 0.04
RETREG3-208ENST00000589797 PKD1L3Q7Z443 1732 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 FRMD3A2A2Y4 597 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 EIF4E1BA6NMX2 242 aaKnown RBP15.3■□□□□ 0.04
RETREG3-208ENST00000589797 EDIL3O43854 480 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 FARP2O94887 1054 aaPredicted RBP15.3■□□□□ 0.04
RETREG3-208ENST00000589797 UPP2O95045 317 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 SHBGP04278 402 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 HMBSP08397 361 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 MARSP56192 900 aaKnown RBP15.3■□□□□ 0.04
RETREG3-208ENST00000589797 TMPRSS15P98073 1019 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 TRIM68Q6AZZ1 485 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 RFX8Q6ZV50 586 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 PRELID2Q8N945 189 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 EPN3Q9H201 632 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 VPS33BQ9H267 617 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 TRABDQ9H4I3 376 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 H0Y3Z8 333 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 TADA2BQ86TJ2 420 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 SLC9A9Q8IVB4 645 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 BRSK2Q8IWQ3 736 aa15.3■□□□□ 0.04
RETREG3-208ENST00000589797 EFCAB13Q8IY85 973 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms