RNA–Protein interactions for RNA: ENST00000589294.1

DNMT1-218, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-218ENST00000589294 FOXN3O00409 490 aaPredicted RBP12.98□□□□□ -0.33
DNMT1-218ENST00000589294 C2CD2LO14523 706 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 PDGFRBP09619 1106 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 PTPN1P18031 435 aaKnown RBP12.98□□□□□ -0.33
DNMT1-218ENST00000589294 CD58P19256 250 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 OR1D2P34982 312 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 RAP1GAPP47736 663 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 NDUFV1P49821 464 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 NDST1P52848 882 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 TSPY1Q01534 308 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 RAB33AQ14088 237 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 DRAP1Q14919 205 aaPredicted RBP12.98□□□□□ -0.33
DNMT1-218ENST00000589294 GRIN2CQ14957 1233 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 MAPRE1Q15691 268 aaKnown RBP12.98□□□□□ -0.33
DNMT1-218ENST00000589294 ARHGAP44Q17R89 818 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 FAM171BQ6P995 826 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 GJB7Q6PEY0 223 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 PRSS55Q6UWB4 352 aaPredicted RBP12.98□□□□□ -0.33
DNMT1-218ENST00000589294 CACNA2D4Q7Z3S7 1137 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 OSTM1Q86WC4 334 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 FMNL3Q8IVF7 1028 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 DCP1BQ8IZD4 617 aaKnown RBP12.98□□□□□ -0.33
DNMT1-218ENST00000589294 WHAMMQ8TF30 809 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 GDPD5Q8WTR4 605 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 KAT5Q92993 513 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 TMEM176AQ96HP8 235 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 ZCWPW1Q9H0M4 648 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 MAFFQ9ULX9 164 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 MYO6Q9UM54 1294 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 PCDHB4Q9Y5E5 795 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 FHOD1Q9Y613 1164 aa12.98□□□□□ -0.33
DNMT1-218ENST00000589294 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.97□□□□□ -0.33
DNMT1-218ENST00000589294 HIDE1A8MVS5 230 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 EPHB6O15197 1021 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 TEX28O15482 410 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 ADH1AP07327 375 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 PAEPP09466 180 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 CNPP09543 421 aaKnown RBP12.97□□□□□ -0.33
DNMT1-218ENST00000589294 IRS1P35568 1242 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 MRE11P49959 708 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 RAD23BP54727 409 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 BPIFB4P59827 614 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 GPR17Q13304 367 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 RAPGEF1Q13905 1077 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 TRIM14Q14142 442 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 NFE2Q16621 373 aaPredicted RBP12.97□□□□□ -0.33
DNMT1-218ENST00000589294 PLPP4Q5VZY2 271 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 TPGS2Q68CL5 300 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 TMEM270Q6UE05 265 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 RSPO2Q6UXX9 243 aaPredicted RBP12.97□□□□□ -0.33
DNMT1-218ENST00000589294 PPFIBP1Q86W92 1011 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 FAM71AQ8IYT1 594 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 ZNF397Q8NF99 534 aaPredicted RBP12.97□□□□□ -0.33
DNMT1-218ENST00000589294 OR10T2Q8NGX3 314 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 ZNF461Q8TAF7 563 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 AUTS2Q8WXX7 1259 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 PPP2R3CQ969Q6 453 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 KLHL5Q96PQ7 755 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 SPAG5Q96R06 1193 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 TTYH3Q9C0H2 523 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 NUCKS1Q9H1E3 243 aaKnown RBP12.97□□□□□ -0.33
DNMT1-218ENST00000589294 PRDM12Q9H4Q4 367 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 CAPN11Q9UMQ6 739 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 CDY1Q9Y6F8 540 aa12.97□□□□□ -0.33
DNMT1-218ENST00000589294 ABLIM3O94929 683 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 ADCY5O95622 1261 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 TPM1P09493 284 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 KRT5P13647 590 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 ACAT1P24752 427 aaKnown RBP12.96□□□□□ -0.33
DNMT1-218ENST00000589294 KLRC2P26717 231 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 STAT1P42224 750 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 ZNF132P52740 706 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 JAM2P57087 298 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 PTPN21Q16825 1174 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 INTS6LQ5JSJ4 861 aaKnown RBP12.96□□□□□ -0.33
DNMT1-218ENST00000589294 LRRTM3Q86VH5 581 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 SLC4A11Q8NBS3 891 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 B3GALNT2Q8NCR0 500 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 MYCBPAPQ8TBZ2 947 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 C2orf15Q8WU43 125 aaKnown RBP12.96□□□□□ -0.33
DNMT1-218ENST00000589294 HEXIM2Q96MH2 286 aaKnown RBP12.96□□□□□ -0.33
DNMT1-218ENST00000589294 CDCA3Q99618 268 aaPredicted RBP12.96□□□□□ -0.33
DNMT1-218ENST00000589294 PKMYT1Q99640 499 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 SYT15Q9BQS2 421 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 GPR88Q9GZN0 384 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 ELOVL4Q9GZR5 314 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 TLE6Q9H808 572 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 NLRC4Q9NPP4 1024 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 AJAP1Q9UKB5 411 aaPredicted RBP12.96□□□□□ -0.33
DNMT1-218ENST00000589294 GTF3C4Q9UKN8 822 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 LUC7L2Q9Y383 392 aaKnown RBP12.96□□□□□ -0.33
DNMT1-218ENST00000589294 NME7Q9Y5B8 376 aa12.96□□□□□ -0.33
DNMT1-218ENST00000589294 MYO9BQ13459 2157 aa12.96□□□□□ -0.34
DNMT1-218ENST00000589294 PLXNA4Q9HCM2 1894 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 MYBPHLA2RUH7 354 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 F8VZ95 297 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 RNF225M0QZC1 329 aaPredicted RBP12.95□□□□□ -0.34
DNMT1-218ENST00000589294 ADAM12O43184 909 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 ATP2C2O75185 946 aa12.95□□□□□ -0.34
DNMT1-218ENST00000589294 CCDC172P0C7W6 258 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms