RNA–Protein interactions for RNA: ENST00000589076.5

SMAD4-207, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-207ENST00000589076 FGL2Q14314 439 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 GALEQ14376 348 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 LLGL1Q15334 1064 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 ATP2B3Q16720 1220 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 AFMIDQ63HM1 303 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 KAZNQ674X7 775 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 DARS2Q6PI48 645 aaKnown RBP4.34□□□□□ -1.71
SMAD4-207ENST00000589076 CCDC149Q6ZUS6 474 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 IFI44Q8TCB0 444 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 SARAFQ96BY9 339 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 TMX3Q96JJ7 454 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 PNKPQ96T60 521 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 VRK1Q99986 396 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-207ENST00000589076 B3GNT5Q9BYG0 378 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 LDAHQ9H6V9 325 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 UNKLQ9H9P5 680 aaKnown RBP4.34□□□□□ -1.71
SMAD4-207ENST00000589076 PNPOQ9NVS9 261 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 AJAP1Q9UKB5 411 aaPredicted RBP4.34□□□□□ -1.71
SMAD4-207ENST00000589076 PCDHA3Q9Y5H8 950 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 ENTPD2Q9Y5L3 495 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 WNT6Q9Y6F9 365 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 AATKQ6ZMQ8 1374 aa4.34□□□□□ -1.71
SMAD4-207ENST00000589076 SETD1BQ9UPS6 1966 aaKnown RBP4.33□□□□□ -1.72
SMAD4-207ENST00000589076 PNPLA7Q6ZV29 1317 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 H3BUI4 141 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 YY2O15391 372 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 BMP15O95972 392 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 PRKCGP05129 697 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 WT1P19544 449 aaPredicted RBP4.33□□□□□ -1.72
SMAD4-207ENST00000589076 MALP21145 153 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 PTGER1P34995 402 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 NKX6-1P78426 367 aaPredicted RBP4.33□□□□□ -1.72
SMAD4-207ENST00000589076 SNAPC2Q13487 334 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 PICALMQ13492 652 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 MTM1Q13496 603 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 KIAA0753Q2KHM9 967 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 NBPF8Q3BBV2 869 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 FAM153CQ494X1 144 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 RNF220Q5VTB9 566 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 OTUD7BQ6GQQ9 843 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 ZNF425Q6IV72 752 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 ZNF529Q6P280 563 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 MAEAQ7L5Y9 396 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 HEATR3Q7Z4Q2 680 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 ZGPATQ8N5A5 531 aaKnown RBP4.33□□□□□ -1.72
SMAD4-207ENST00000589076 FAM156AQ8NDB6 213 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 STON2Q8WXE9 905 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 MTFMTQ96DP5 389 aaKnown RBP4.33□□□□□ -1.72
SMAD4-207ENST00000589076 WDCPQ9H6R7 721 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 LMBRD1Q9NUN5 540 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 USP25Q9UHP3 1055 aa4.33□□□□□ -1.72
SMAD4-207ENST00000589076 ATRNL1Q5VV63 1379 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 GOLIM4O00461 696 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 MPPED1O15442 326 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 TYRP14679 529 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 ZNF280AP59817 542 aaPredicted RBP4.32□□□□□ -1.72
SMAD4-207ENST00000589076 SEMA5AQ13591 1074 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 CNN3Q15417 329 aaKnown RBP4.32□□□□□ -1.72
SMAD4-207ENST00000589076 TSTD2Q5T7W7 516 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 FITM2Q8N6M3 262 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 PDPRQ8NCN5 879 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 SVIPQ8NHG7 77 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 PLBD2Q8NHP8 589 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 SSH3Q8TE77 659 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 NUP133Q8WUM0 1156 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 RAB24Q969Q5 203 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 NACC2Q96BF6 587 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 FBXL20Q96IG2 436 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 GNL3LQ9NVN8 582 aaKnown RBP4.32□□□□□ -1.72
SMAD4-207ENST00000589076 SIDT1Q9NXL6 827 aaKnown RBP4.32□□□□□ -1.72
SMAD4-207ENST00000589076 ABCF2Q9UG63 623 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 ACTL7AQ9Y615 435 aa4.32□□□□□ -1.72
SMAD4-207ENST00000589076 MANSC4A6NHS7 340 aaPredicted RBP4.31□□□□□ -1.72
SMAD4-207ENST00000589076 LRRC14BA6NHZ5 514 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 CGB1A6NKQ9 187 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 APAF1O14727 1248 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 CELA2AP08217 269 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 FPR1P21462 350 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 PCSK1P29120 753 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 GRIA3P42263 894 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 RHBDL3P58872 404 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 RAB1AP62820 205 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 CREMQ03060 361 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 OS9Q13438 667 aaPredicted RBP4.31□□□□□ -1.72
SMAD4-207ENST00000589076 PLS1Q14651 629 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 FLYWCH1Q4VC44 716 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 PABPC1LQ4VXU2 614 aaKnown RBP4.31□□□□□ -1.72
SMAD4-207ENST00000589076 DACT2Q5SW24 774 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 SYCP2LQ5T4T6 812 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 SEM1Q6ZVN7 128 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 SAMD3Q8N6K7 520 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 IL17RDQ8NFM7 739 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 FBXO18Q8NFZ0 1043 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 SLC35A4Q96G79 324 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 C11orf54Q9H0W9 315 aaPredicted RBP4.31□□□□□ -1.72
SMAD4-207ENST00000589076 NUP62CLQ9H1M0 184 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 ARMT1Q9H993 441 aa4.31□□□□□ -1.72
SMAD4-207ENST00000589076 SARS2Q9NP81 518 aaKnown RBP4.31□□□□□ -1.72
SMAD4-207ENST00000589076 FEZ2Q9UHY8 353 aaPredicted RBP4.31□□□□□ -1.72
SMAD4-207ENST00000589076 FAM50BQ9Y247 325 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms