RNA–Protein interactions for RNA: ENST00000588477.5

IFT20-216, Transcript of intraflagellar transport 20, humanhuman

TSL 5 BASIC

Gene IFT20, Length 774 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT20-216ENST00000588477 HSFX1Q9UBD0 423 aa16.58■□□□□ 0.24
IFT20-216ENST00000588477 CEP192Q8TEP8 1941 aa16.58■□□□□ 0.24
IFT20-216ENST00000588477 ZZEF1O43149 2961 aa16.58■□□□□ 0.24
IFT20-216ENST00000588477 HELZP42694 1942 aaKnown RBP16.57■□□□□ 0.24
IFT20-216ENST00000588477 C4orf47A7E2U8 309 aa16.57■□□□□ 0.24
IFT20-216ENST00000588477 MAPTP10636 758 aaKnown RBP16.57■□□□□ 0.24
IFT20-216ENST00000588477 ODC1P11926 461 aa16.57■□□□□ 0.24
IFT20-216ENST00000588477 PLS3P13797 630 aa16.57■□□□□ 0.24
IFT20-216ENST00000588477 TUFMP49411 452 aaKnown RBP16.57■□□□□ 0.24
IFT20-216ENST00000588477 LILRA4P59901 499 aa16.57■□□□□ 0.24
IFT20-216ENST00000588477 CREB5Q02930 508 aa16.57■□□□□ 0.24
IFT20-216ENST00000588477 FOXC1Q12948 553 aa16.57■□□□□ 0.24
IFT20-216ENST00000588477 GNL2Q13823 731 aaKnown RBP16.57■□□□□ 0.24
IFT20-216ENST00000588477 KRT79Q5XKE5 535 aa16.57■□□□□ 0.24
IFT20-216ENST00000588477 MAB21L3Q8N8X9 362 aa16.57■□□□□ 0.24
IFT20-216ENST00000588477 OR10T2Q8NGX3 314 aa16.57■□□□□ 0.24
IFT20-216ENST00000588477 SPIRE2Q8WWL2 714 aa16.57■□□□□ 0.24
IFT20-216ENST00000588477 BICD1Q96G01 975 aa16.57■□□□□ 0.24
IFT20-216ENST00000588477 FBRSL1Q9HCM7 1045 aaKnown RBP16.57■□□□□ 0.24
IFT20-216ENST00000588477 KCNG1Q9UIX4 513 aa16.57■□□□□ 0.24
IFT20-216ENST00000588477 CCL26Q9Y258 94 aa16.57■□□□□ 0.24
IFT20-216ENST00000588477 GTF3C5Q9Y5Q8 519 aaPredicted RBP16.57■□□□□ 0.24
IFT20-216ENST00000588477 SPEGQ15772 3267 aa16.57■□□□□ 0.24
IFT20-216ENST00000588477 CEP295Q9C0D2 2601 aa16.56■□□□□ 0.24
IFT20-216ENST00000588477 DCLK1O15075 740 aa16.56■□□□□ 0.24
IFT20-216ENST00000588477 CAVIN2O95810 425 aa16.56■□□□□ 0.24
IFT20-216ENST00000588477 GUCY2CP25092 1073 aa16.56■□□□□ 0.24
IFT20-216ENST00000588477 AVPR1AP37288 418 aa16.56■□□□□ 0.24
IFT20-216ENST00000588477 GALK1P51570 392 aa16.56■□□□□ 0.24
IFT20-216ENST00000588477 NEK4P51957 841 aa16.56■□□□□ 0.24
IFT20-216ENST00000588477 ELF2Q15723 593 aa16.56■□□□□ 0.24
IFT20-216ENST00000588477 FAM212AQ96EL1 285 aa16.56■□□□□ 0.24
IFT20-216ENST00000588477 TIPINQ9BVW5 301 aa16.56■□□□□ 0.24
IFT20-216ENST00000588477 NOL7Q9UMY1 257 aaKnown RBP16.56■□□□□ 0.24
IFT20-216ENST00000588477 WDFY3Q8IZQ1 3526 aa16.56■□□□□ 0.24
IFT20-216ENST00000588477 ADAMTS9Q9P2N4 1935 aa16.56■□□□□ 0.24
IFT20-216ENST00000588477 PI4KAP42356 2102 aa16.55■□□□□ 0.24
IFT20-216ENST00000588477 TNRC6BQ9UPQ9 1833 aaKnown RBP16.55■□□□□ 0.24
IFT20-216ENST00000588477 RHOBTB1O94844 696 aa16.55■□□□□ 0.24
IFT20-216ENST00000588477 ARSAP15289 507 aa16.55■□□□□ 0.24
IFT20-216ENST00000588477 SPINK2P20155 84 aa16.55■□□□□ 0.24
IFT20-216ENST00000588477 DRD1P21728 446 aa16.55■□□□□ 0.24
IFT20-216ENST00000588477 U2AF2P26368 475 aaKnown RBP eCLIP16.55■□□□□ 0.242e-7■■■□□ 17.6
IFT20-216ENST00000588477 NMT1P30419 496 aaKnown RBP16.55■□□□□ 0.24
IFT20-216ENST00000588477 TRAPPC10P48553 1259 aa16.55■□□□□ 0.24
IFT20-216ENST00000588477 AMPD2Q01433 879 aa16.55■□□□□ 0.24
IFT20-216ENST00000588477 ZNF252P-AS1Q0IIN9 211 aa16.55■□□□□ 0.24
IFT20-216ENST00000588477 BFSP1Q12934 665 aa16.55■□□□□ 0.24
IFT20-216ENST00000588477 ZRSR1Q15695 479 aaKnown RBP16.55■□□□□ 0.24
IFT20-216ENST00000588477 ENOX2Q16206 610 aaKnown RBP16.55■□□□□ 0.24
IFT20-216ENST00000588477 DAB2IPQ5VWQ8 1189 aa16.55■□□□□ 0.24
IFT20-216ENST00000588477 SPATA1Q5VX52 437 aa16.55■□□□□ 0.24
IFT20-216ENST00000588477 RPLP0P6Q8NHW5 317 aa16.55■□□□□ 0.24
IFT20-216ENST00000588477 USP13Q92995 863 aaPredicted RBP16.55■□□□□ 0.24
IFT20-216ENST00000588477 MMTAG2Q9BU76 263 aaKnown RBP16.55■□□□□ 0.24
IFT20-216ENST00000588477 ZCWPW1Q9H0M4 648 aa16.55■□□□□ 0.24
IFT20-216ENST00000588477 RPF1Q9H9Y2 349 aaKnown RBP16.55■□□□□ 0.24
IFT20-216ENST00000588477 BCLAF3A2AJT9 711 aaKnown RBP16.54■□□□□ 0.24
IFT20-216ENST00000588477 HOXB3P14651 431 aaPredicted RBP16.54■□□□□ 0.24
IFT20-216ENST00000588477 KARSQ15046 597 aaKnown RBP16.54■□□□□ 0.24
IFT20-216ENST00000588477 IL17AQ16552 155 aa16.54■□□□□ 0.24
IFT20-216ENST00000588477 SH3PXD2AQ5TCZ1 1133 aa16.54■□□□□ 0.24
IFT20-216ENST00000588477 NAIF1Q69YI7 327 aaPredicted RBP16.54■□□□□ 0.24
IFT20-216ENST00000588477 JADE1Q6IE81 842 aa16.54■□□□□ 0.24
IFT20-216ENST00000588477 CC2D1AQ6P1N0 951 aaPredicted RBP16.54■□□□□ 0.24
IFT20-216ENST00000588477 TMEM150AQ86TG1 271 aa16.54■□□□□ 0.24
IFT20-216ENST00000588477 FBXO18Q8NFZ0 1043 aa16.54■□□□□ 0.24
IFT20-216ENST00000588477 P2RY13Q9BPV8 354 aa16.54■□□□□ 0.24
IFT20-216ENST00000588477 TDP1Q9NUW8 608 aa16.54■□□□□ 0.24
IFT20-216ENST00000588477 ZMYM5Q9UJ78 669 aa16.54■□□□□ 0.24
IFT20-216ENST00000588477 INVSQ9Y283 1065 aa16.54■□□□□ 0.24
IFT20-216ENST00000588477 PCDHB6Q9Y5E3 794 aa16.54■□□□□ 0.24
IFT20-216ENST00000588477 ASCC3Q8N3C0 2202 aaKnown RBP16.54■□□□□ 0.24
IFT20-216ENST00000588477 AKAP13Q12802 2813 aa16.54■□□□□ 0.24
IFT20-216ENST00000588477 LNP1A1A4G5 178 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 OGTO15294 1046 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 TOP3BO95985 862 aaKnown RBP16.53■□□□□ 0.24
IFT20-216ENST00000588477 F11P03951 625 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 CYP11A1P05108 521 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 GBP1P32455 592 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 GJA4P35212 333 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 LIG4P49917 911 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 TOB1P50616 345 aaPredicted RBP16.53■□□□□ 0.24
IFT20-216ENST00000588477 DGKEP52429 567 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 NLRP12P59046 1061 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 PSMD2Q13200 908 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 DMC1Q14565 340 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 KYAT1Q16773 422 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 FBXO43Q4G163 708 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 C9orf57Q5W0N0 161 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 TXNDC8Q6A555 127 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 SYT13Q7L8C5 426 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 LRRTM3Q86VH5 581 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 CCDC83Q8IWF9 413 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 SYT2Q8N9I0 419 aaPredicted RBP16.53■□□□□ 0.24
IFT20-216ENST00000588477 KDF1Q8NAX2 398 aaPredicted RBP16.53■□□□□ 0.24
IFT20-216ENST00000588477 RIN3Q8TB24 985 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 SPPL2BQ8TCT7 592 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 TSPAN18Q96SJ8 248 aa16.53■□□□□ 0.24
IFT20-216ENST00000588477 KIF9Q9HAQ2 790 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms