RNA–Protein interactions for RNA: ENST00000587988.5

SMARCA4-213, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2

Gene SMARCA4, Length 552 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-213ENST00000587988 TWNKQ96RR1 684 aa11.44□□□□□ -0.58
SMARCA4-213ENST00000587988 GAS2L1Q99501 681 aaPredicted RBP11.44□□□□□ -0.58
SMARCA4-213ENST00000587988 ZCWPW1Q9H0M4 648 aa11.44□□□□□ -0.58
SMARCA4-213ENST00000587988 GANQ9H2C0 597 aa11.44□□□□□ -0.58
SMARCA4-213ENST00000587988 SNX25Q9H3E2 840 aa11.44□□□□□ -0.58
SMARCA4-213ENST00000587988 DPEP3Q9H4B8 488 aa11.44□□□□□ -0.58
SMARCA4-213ENST00000587988 NSUN3Q9H649 340 aaKnown RBP11.44□□□□□ -0.58
SMARCA4-213ENST00000587988 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.44□□□□□ -0.58
SMARCA4-213ENST00000587988 CISHQ9NSE2 258 aa11.44□□□□□ -0.58
SMARCA4-213ENST00000587988 APEX2Q9UBZ4 518 aa11.44□□□□□ -0.58
SMARCA4-213ENST00000587988 DNAJC12Q9UKB3 198 aa11.44□□□□□ -0.58
SMARCA4-213ENST00000587988 STXBP5LQ9Y2K9 1186 aa11.44□□□□□ -0.58
SMARCA4-213ENST00000587988 FHOD1Q9Y613 1164 aa11.44□□□□□ -0.58
SMARCA4-213ENST00000587988 PLXNA3P51805 1871 aa11.44□□□□□ -0.58
SMARCA4-213ENST00000587988 PRRC2BQ5JSZ5 2229 aaKnown RBP11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 WDR27A2RRH5 827 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 OR6C75A6NL08 312 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 A8MXQ7 604 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 RNF225M0QZC1 329 aaPredicted RBP11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 CILPO75339 1184 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 VNN2O95498 520 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 ACO1P21399 889 aaKnown RBP11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 TBXAS1P24557 533 aaPredicted RBP11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 KLRC2P26717 231 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 PBX1P40424 430 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 NRIP1P48552 1158 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 NDUFV1P49821 464 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 PSMC1P62191 440 aaKnown RBP11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 ROR1Q01973 937 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 GCNT1Q02742 428 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 INCA1Q0VD86 236 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 RAB33AQ14088 237 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 ARHGAP44Q17R89 818 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 ZNF394Q53GI3 561 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 INTS6LQ5JSJ4 861 aaKnown RBP11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 IQCEQ6IPM2 695 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 MICALL1Q8N3F8 863 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 PCMTD1Q96MG8 357 aaPredicted RBP11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 PKMYT1Q99640 499 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 ACBD6Q9BR61 282 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 NAA15Q9BXJ9 866 aaKnown RBP11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 EMILIN2Q9BXX0 1053 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 ELOVL4Q9GZR5 314 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 IGFLR1Q9H665 355 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 TLE6Q9H808 572 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 PLCB1Q9NQ66 1216 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 CRTAC1Q9NQ79 661 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 FAM207AQ9NSI2 230 aaPredicted RBP11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 TMLHEQ9NVH6 421 aa11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 BARX2Q9UMQ3 279 aaPredicted RBP11.43□□□□□ -0.58
SMARCA4-213ENST00000587988 A0A1W2PQC6 194 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 MYBPHLA2RUH7 354 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 TGM5O43548 720 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 ABLIM3O94929 683 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 CALCAP01258 141 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 SPATA31D3P0C874 917 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 PNMA6AP0CW24 399 aaPredicted RBP11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 CPB1P15086 417 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 UCHL3P15374 230 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 PCSK1P29120 753 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 CLCN4P51793 760 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 RAD23BP54727 409 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 MFAP3P55082 362 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 POLR2FP61218 127 aaKnown RBP11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 CREMQ03060 361 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 HYAL1Q12794 435 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 DUSP6Q16828 381 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 UVSSAQ2YD98 709 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 SLC39A12Q504Y0 691 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 FAM171BQ6P995 826 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 LILRA6Q6PI73 481 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 SARM1Q6SZW1 724 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 RNF19BQ6ZMZ0 732 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 SPATA31D4Q6ZUB0 917 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 ACOT1Q86TX2 421 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 UNC93AQ86WB7 457 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 VN1R2Q8NFZ6 395 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 SLC22A17Q8WUG5 538 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 PGLYRP2Q96PD5 576 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 SYT15Q9BQS2 421 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 GPR88Q9GZN0 384 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 GTF3C4Q9UKN8 822 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 CDH9Q9ULB4 789 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 PCDHB4Q9Y5E5 795 aa11.42□□□□□ -0.58
SMARCA4-213ENST00000587988 FOXN3O00409 490 aaPredicted RBP11.41□□□□□ -0.58
SMARCA4-213ENST00000587988 LINC01565O15544 149 aa11.41□□□□□ -0.58
SMARCA4-213ENST00000587988 SEC24AO95486 1093 aa11.41□□□□□ -0.58
SMARCA4-213ENST00000587988 ADH1AP07327 375 aa11.41□□□□□ -0.58
SMARCA4-213ENST00000587988 FOSL2P15408 326 aa11.41□□□□□ -0.58
SMARCA4-213ENST00000587988 EPCAMP16422 314 aa11.41□□□□□ -0.58
SMARCA4-213ENST00000587988 PTPN1P18031 435 aaKnown RBP11.41□□□□□ -0.58
SMARCA4-213ENST00000587988 TSPY1Q01534 308 aa11.41□□□□□ -0.58
SMARCA4-213ENST00000587988 ADCY1Q08828 1119 aa11.41□□□□□ -0.58
SMARCA4-213ENST00000587988 GPR17Q13304 367 aa11.41□□□□□ -0.58
SMARCA4-213ENST00000587988 RAPGEF1Q13905 1077 aa11.41□□□□□ -0.58
SMARCA4-213ENST00000587988 KCNC3Q14003 757 aa11.41□□□□□ -0.58
SMARCA4-213ENST00000587988 DRAP1Q14919 205 aaPredicted RBP11.41□□□□□ -0.58
SMARCA4-213ENST00000587988 CCDC85BQ15834 202 aaPredicted RBP11.41□□□□□ -0.58
SMARCA4-213ENST00000587988 MDH1BQ5I0G3 518 aa11.41□□□□□ -0.58
SMARCA4-213ENST00000587988 LLGL2Q6P1M3 1020 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms