RNA–Protein interactions for RNA: ENST00000587201.5

TPM4-206, Transcript of tropomyosin 4, humanhuman

TSL 2

Gene TPM4, Length 877 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-206ENST00000587201 C12orf56Q8IXR9 622 aa19.02■□□□□ 0.64
TPM4-206ENST00000587201 KIAA0895Q8NCT3 520 aa19.02■□□□□ 0.64
TPM4-206ENST00000587201 PSMG2Q969U7 264 aa19.02■□□□□ 0.64
TPM4-206ENST00000587201 ELSPBP1Q96BH3 223 aa19.02■□□□□ 0.64
TPM4-206ENST00000587201 CCDC127Q96BQ5 260 aa19.02■□□□□ 0.64
TPM4-206ENST00000587201 HPDLQ96IR7 371 aa19.02■□□□□ 0.64
TPM4-206ENST00000587201 CGRRF1Q99675 332 aa19.02■□□□□ 0.64
TPM4-206ENST00000587201 LRRC3Q9BY71 257 aa19.02■□□□□ 0.64
TPM4-206ENST00000587201 PLA2G2FQ9BZM2 168 aa19.02■□□□□ 0.64
TPM4-206ENST00000587201 SLITRK6Q9H5Y7 841 aa19.02■□□□□ 0.64
TPM4-206ENST00000587201 TBC1D17Q9HA65 648 aa19.02■□□□□ 0.64
TPM4-206ENST00000587201 GDPD2Q9HCC8 539 aa19.02■□□□□ 0.64
TPM4-206ENST00000587201 ZFP14Q9HCL3 533 aa19.02■□□□□ 0.64
TPM4-206ENST00000587201 DDX43Q9NXZ2 648 aaKnown RBP19.02■□□□□ 0.64
TPM4-206ENST00000587201 ABI2Q9NYB9 513 aaPredicted RBP19.02■□□□□ 0.64
TPM4-206ENST00000587201 A0A1W2PRU2 124 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 EXOC3O60645 756 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 PRPF40AO75400 957 aaKnown RBP19.01■□□□□ 0.63
TPM4-206ENST00000587201 PFKPQ01813 784 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 VEPH1Q14D04 833 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 TAF12Q16514 161 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 FAM78AQ5JUQ0 283 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 TRAPPC11Q7Z392 1133 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 ADGRF2Q8IZF7 708 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 TOP6BLQ8N6T0 577 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 GOLGA5Q8TBA6 731 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 SHKBP1Q8TBC3 707 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 CCDC47Q96A33 483 aaKnown RBP19.01■□□□□ 0.63
TPM4-206ENST00000587201 ZSWIM3Q96MP5 696 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 ASB16Q96NS5 453 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 LPIN3Q9BQK8 851 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 ACBD6Q9BR61 282 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 PCDHB5Q9Y5E4 795 aa19.01■□□□□ 0.63
TPM4-206ENST00000587201 RPN1P04843 607 aaKnown RBP19■□□□□ 0.63
TPM4-206ENST00000587201 HAPLN1P10915 354 aaPredicted RBP19■□□□□ 0.63
TPM4-206ENST00000587201 FCARP24071 287 aa19■□□□□ 0.63
TPM4-206ENST00000587201 ACAT1P24752 427 aaKnown RBP19■□□□□ 0.63
TPM4-206ENST00000587201 LHX1P48742 406 aa19■□□□□ 0.63
TPM4-206ENST00000587201 SNW1Q13573 536 aaKnown RBP19■□□□□ 0.63
TPM4-206ENST00000587201 NFE2Q16621 373 aaPredicted RBP19■□□□□ 0.63
TPM4-206ENST00000587201 DPH6Q7L8W6 267 aa19■□□□□ 0.63
TPM4-206ENST00000587201 OSTM1Q86WC4 334 aa19■□□□□ 0.63
TPM4-206ENST00000587201 SPATA18Q8TC71 538 aa19■□□□□ 0.63
TPM4-206ENST00000587201 SMARCD2Q92925 531 aa19■□□□□ 0.63
TPM4-206ENST00000587201 SHDQ96IW2 340 aa19■□□□□ 0.63
TPM4-206ENST00000587201 PI4K2AQ9BTU6 479 aa19■□□□□ 0.63
TPM4-206ENST00000587201 GPR88Q9GZN0 384 aa19■□□□□ 0.63
TPM4-206ENST00000587201 IRF2BPLQ9H1B7 796 aa19■□□□□ 0.63
TPM4-206ENST00000587201 ATXN3LQ9H3M9 355 aa19■□□□□ 0.63
TPM4-206ENST00000587201 GOLPH3LQ9H4A5 285 aa19■□□□□ 0.63
TPM4-206ENST00000587201 ZNF334Q9HCZ1 680 aaPredicted RBP19■□□□□ 0.63
TPM4-206ENST00000587201 TMLHEQ9NVH6 421 aa19■□□□□ 0.63
TPM4-206ENST00000587201 WDFY4Q6ZS81 3184 aa18.99■□□□□ 0.63
TPM4-206ENST00000587201 H0Y858 1186 aa18.99■□□□□ 0.63
TPM4-206ENST00000587201 FGF19O95750 216 aa18.99■□□□□ 0.63
TPM4-206ENST00000587201 PRR29P0C7W0 189 aa18.99■□□□□ 0.63
TPM4-206ENST00000587201 ATF6P18850 670 aa18.99■□□□□ 0.63
TPM4-206ENST00000587201 GABRR2P28476 465 aa18.99■□□□□ 0.63
TPM4-206ENST00000587201 NUCB2P80303 420 aa18.99■□□□□ 0.63
TPM4-206ENST00000587201 GRM2Q14416 872 aa18.99■□□□□ 0.63
TPM4-206ENST00000587201 SOWAHAQ2M3V2 549 aa18.99■□□□□ 0.63
TPM4-206ENST00000587201 SLC44A4Q53GD3 710 aa18.99■□□□□ 0.63
TPM4-206ENST00000587201 INTS6LQ5JSJ4 861 aaKnown RBP18.99■□□□□ 0.63
TPM4-206ENST00000587201 PHLDB3Q6NSJ2 640 aa18.99■□□□□ 0.63
TPM4-206ENST00000587201 KRBA2Q6ZNG9 492 aa18.99■□□□□ 0.63
TPM4-206ENST00000587201 ZSCAN18Q8TBC5 510 aaPredicted RBP18.99■□□□□ 0.63
TPM4-206ENST00000587201 GIPC2Q8TF65 315 aa18.99■□□□□ 0.63
TPM4-206ENST00000587201 GABRDO14764 452 aa18.98■□□□□ 0.63
TPM4-206ENST00000587201 ZNF202O95125 648 aa18.98■□□□□ 0.63
TPM4-206ENST00000587201 CST3P01034 146 aaPredicted RBP18.98■□□□□ 0.63
TPM4-206ENST00000587201 PCSK1P29120 753 aa18.98■□□□□ 0.63
TPM4-206ENST00000587201 HOXD11P31277 338 aaPredicted RBP18.98■□□□□ 0.63
TPM4-206ENST00000587201 STARD6P59095 220 aa18.98■□□□□ 0.63
TPM4-206ENST00000587201 MLF2Q15773 248 aaPredicted RBP18.98■□□□□ 0.63
TPM4-206ENST00000587201 ALYREFQ86V81 257 aaKnown RBP18.98■□□□□ 0.63
TPM4-206ENST00000587201 ATOH1Q92858 354 aaPredicted RBP18.98■□□□□ 0.63
TPM4-206ENST00000587201 MMS19Q96T76 1030 aa18.98■□□□□ 0.63
TPM4-206ENST00000587201 KCTD10Q9H3F6 313 aa18.98■□□□□ 0.63
TPM4-206ENST00000587201 GTF3C4Q9UKN8 822 aa18.98■□□□□ 0.63
TPM4-206ENST00000587201 HCRTO43612 131 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 KIF20AO95235 890 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 VIPR2P41587 438 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 PRKCQQ04759 706 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 DPYDQ12882 1025 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 TRPC3Q13507 836 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 ARHGAP15Q53QZ3 475 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 STXBP5Q5T5C0 1151 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 GAREM2Q75VX8 874 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 CCDC105Q8IYK2 499 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 ZNF516Q92618 1163 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 GCNAQ96QF7 691 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 TRMT61BQ9BVS5 477 aaKnown RBP18.97■□□□□ 0.63
TPM4-206ENST00000587201 BRD9Q9H8M2 597 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 TRPV4Q9HBA0 871 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 FAM86C1Q9NVL1 165 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 SIT1Q9Y3P8 196 aa18.97■□□□□ 0.63
TPM4-206ENST00000587201 GOLGA6L4A6NEF3 574 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 PDXKO00764 312 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 PHACTR2O75167 634 aa18.96■□□□□ 0.63
TPM4-206ENST00000587201 RHOBTB3O94955 611 aa18.96■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms