RNA–Protein interactions for RNA: ENST00000584042.1

CDK5RAP3-230, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 3

Gene CDK5RAP3, Length 638 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-230ENST00000584042 SHHQ15465 462 aa17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 STILQ15468 1287 aa17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 OVOS1Q6IE37 1185 aa17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 TRIM72Q6ZMU5 477 aa17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 LNX1Q8TBB1 728 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 TMEM169Q96HH4 297 aa17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ZNF830Q96NB3 372 aaPredicted RBP17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 HERC2P3Q9BVR0 1158 aa17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 UBE2OQ9C0C9 1292 aaKnown RBP17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ACP6Q9NPH0 428 aa17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 STK39Q9UEW8 545 aa17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 RWDD3Q9Y3V2 267 aa17.8■□□□□ 0.44
CDK5RAP3-230ENST00000584042 EIF3CLB5ME19 914 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 NT5C1B-RDH14C9J2C7 533 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 THAP12O43422 761 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 MED7O43513 233 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 OAZ2O95190 189 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 NDUFA10O95299 355 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 IPO7O95373 1038 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 CD19P15391 556 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 BRD2P25440 801 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 FMO1Q01740 532 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 MTF1Q14872 753 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 SLC18A3Q16572 532 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 SGO2Q562F6 1265 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 FAM171A1Q5VUB5 890 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ZNF280DQ6N043 979 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 CRYBG2Q8N1P7 616 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 B3GALNT2Q8NCR0 500 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 EIF3CQ99613 913 aaKnown RBP17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 SYT15Q9BQS2 421 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 GPR62Q9BZJ7 368 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 DPEP3Q9H4B8 488 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 SPG21Q9NZD8 308 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 CDH9Q9ULB4 789 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 NENFQ9UMX5 172 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 PCDHGC3Q9UN70 934 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 PCDHB12Q9Y5F1 795 aa17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 TIMM13Q9Y5L4 95 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 EPN1Q9Y6I3 576 aaPredicted RBP17.79■□□□□ 0.44
CDK5RAP3-230ENST00000584042 CEP290O15078 2479 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 H0YGN5 161 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 O00370 1275 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 DDX3XO00571 662 aaKnown RBP eCLIP17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 MMEP08473 750 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 CHRNB2P17787 502 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 LMO2P25791 158 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ORC1Q13415 861 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 INTS6LQ5JSJ4 861 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 VARS2Q5ST30 1063 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 TAF3Q5VWG9 929 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ARHGAP17Q68EM7 881 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ACOT1Q86TX2 421 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 GLYCTKQ8IVS8 523 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 THEM5Q8N1Q8 247 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ZNF606Q8WXB4 792 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 TFAP2BQ92481 460 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 RTP3Q9BQQ7 232 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ACBD6Q9BR61 282 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 OXCT2Q9BYC2 517 aaPredicted RBP17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 PUF60Q9UHX1 559 aaKnown RBP17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 WDR3Q9UNX4 943 aaKnown RBP eCLIP17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ZKSCAN5Q9Y2L8 839 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 PTPRDP23468 1912 aa17.78■□□□□ 0.44
CDK5RAP3-230ENST00000584042 LCHNA4D1U4 455 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 HCRTO43612 131 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 LSM8O95777 96 aaKnown RBP17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 SOD2P04179 222 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 TNFAIP3P21580 790 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 BMP8BP34820 402 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 TSPY1Q01534 308 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 PLCB3Q01970 1234 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 MRPL58Q14197 206 aaKnown RBP17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 USP41Q3LFD5 358 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 PPP1R2P3Q6NXS1 205 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 DDX53Q86TM3 631 aaKnown RBP17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 SLC30A5Q8TAD4 765 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 HEXIM2Q96MH2 286 aaKnown RBP17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ZSWIM1Q9BR11 485 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 TTPALQ9BTX7 342 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 VN1R3Q9BXE9 311 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 SPTLC3Q9NUV7 552 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 ADAMTS1Q9UHI8 967 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 PYCARDQ9ULZ3 195 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 PCDHA11Q9Y5I1 949 aa17.77■□□□□ 0.44
CDK5RAP3-230ENST00000584042 PLXNA4Q9HCM2 1894 aa17.77■□□□□ 0.43
CDK5RAP3-230ENST00000584042 A0A087X0T9 212 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 LINC01553A4QN01 128 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 OR6C75A6NL08 312 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CALCAP01258 141 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CYP1A1P04798 512 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 FAM228BP0C875 321 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 GZMAP12544 262 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 ACAT1P24752 427 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 CDH5P33151 784 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 PSMC1P62191 440 aaKnown RBP17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 GFPT1Q06210 699 aaPredicted RBP17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 SPA17Q15506 151 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 RTP2Q5QGT7 225 aa17.76■□□□□ 0.43
CDK5RAP3-230ENST00000584042 LCLAT1Q6UWP7 414 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 122 ms