RNA–Protein interactions for RNA: ENST00000583988.1

PPP4R1-227, Transcript of protein phosphatase 4 regulatory subunit 1, human

TSL 3

Gene PPP4R1, Length 582 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PPP4R1-227	ENST00000583988	CCDC146	Q8IYE0	955 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	PDPR	Q8NCN5	879 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ASB10	Q8WXI3	467 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ZC3H10	Q96K80	434 aa	Known RBP	4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	CNPPD1	Q9BV87	410 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ALOXE3	Q9BYJ1	711 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	BHMT2	Q9H2M3	363 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ARMT1	Q9H993	441 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ZMAT3	Q9HA38	289 aa	Known RBP	4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	GALNT9	Q9HCQ5	603 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	USP25	Q9UHP3	1055 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	PCDHA6	Q9UN73	950 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	NOX1	Q9Y5S8	564 aa		4.92	□□□□□ -1.62
PPP4R1-227	ENST00000583988	PIPSL	A2A3N6	862 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988		E9PLN8	166 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	FOS	P01100	380 aa	Predicted RBP	4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	HKR1	P10072	659 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	MYB	P10242	640 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	CYP2C9	P11712	490 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	XRCC6	P12956	609 aa	Known RBP eCLIP	4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	HDC	P19113	662 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	PEX2	P28328	305 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	PLA2G5	P39877	138 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	PSMC1	P62191	440 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ZNF844	Q08AG5	666 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	SWSAP1	Q6NVH7	229 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	RAB11FIP1	Q6WKZ4	1283 aa	Predicted RBP	4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	USP37	Q86T82	979 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	SLC44A3	Q8N4M1	653 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	OR6B3	Q8NGW1	331 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	SVIP	Q8NHG7	77 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	PHKB	Q93100	1093 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	NMD3	Q96D46	503 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	RNF31	Q96EP0	1072 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	LRIG1	Q96JA1	1093 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	MSLNL	Q96KJ4	702 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	MOGAT1	Q96PD6	335 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	VKORC1	Q9BQB6	163 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	KRTAP9-8	Q9BYQ0	159 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	TRIM54	Q9BYV2	358 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	KIAA1586	Q9HCI6	787 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	SLAMF7	Q9NQ25	335 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	SYBU	Q9NX95	663 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	CTTNBP2NL	Q9P2B4	639 aa		4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	TES	Q9UGI8	421 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	MTO1	Q9Y2Z2	717 aa	Known RBP	4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	EPN1	Q9Y6I3	576 aa	Predicted RBP	4.91	□□□□□ -1.62
PPP4R1-227	ENST00000583988	ZNF785	A8K8V0	405 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	NBPF7	P0C2Y1	421 aa	Predicted RBP	4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	NPR1	P16066	1061 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	KCNA2	P16389	499 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	KCNJ5	P48544	419 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	PICALM	Q13492	652 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	CNGA2	Q16280	664 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	MAP9	Q49MG5	647 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SLC44A4	Q53GD3	710 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	STRIP1	Q5VSL9	837 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	ABHD17B	Q5VST6	288 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SP5	Q6BEB4	398 aa	Predicted RBP	4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	KSR2	Q6VAB6	950 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	ZNF783	Q6ZMS7	281 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	TMPRSS9	Q7Z410	1059 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	PPP1R32	Q7Z5V6	425 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	POC1B	Q8TC44	478 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	CAMSAP3	Q9P1Y5	1249 aa	Predicted RBP	4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	AGAP1	Q9UPQ3	857 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SPATA31A3	Q5VYP0	1347 aa		4.9	□□□□□ -1.63
PPP4R1-227	ENST00000583988	CCDC195	A0A1B0GUA6	201 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988		A0A1W2PS29	197 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	TBC1D4	O60343	1298 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	ERN1	O75460	977 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SUN1	O94901	812 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	ZFPL1	O95159	310 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	EGR2	P11161	476 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	FDXR	P22570	491 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SLC7A1	P30825	629 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	VAV2	P52735	878 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	ZNF135	P52742	658 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SEC24C	P53992	1094 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	WNT3	P56703	355 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	FMO1	Q01740	532 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	EXOSC9	Q06265	439 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SCAP	Q12770	1279 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	FOXI1	Q12951	378 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	DYRK1A	Q13627	763 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	FAM160B1	Q5W0V3	765 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	LMBRD2	Q68DH5	695 aa	Predicted RBP	4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	NSUN7	Q8NE18	718 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	LINC00476	Q8WZB0	136 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	COQ10A	Q96MF6	247 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	NT5C1B	Q96P26	610 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	TRIB1	Q96RU8	372 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	STRBP	Q96SI9	672 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SMO	Q99835	787 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	UNK	Q9C0B0	810 aa	Known RBP	4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	ZNF518B	Q9C0D4	1074 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	SYNPO2L	Q9H987	977 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	CPA4	Q9UI42	421 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	CDYL	Q9Y232	598 aa		4.89	□□□□□ -1.63
PPP4R1-227	ENST00000583988	PRAMEF33	A0A0G2JMD5	474 aa		4.88	□□□□□ -1.63

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms