RNA–Protein interactions for RNA: ENST00000583804.2

TOP3A-216, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 5

Gene TOP3A, Length 1,465 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-216ENST00000583804 NLRC5Q86WI3 1866 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 TMEM265A0A087WTH1 108 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 A8MXQ7 604 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 H7C4K7 107 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 TACC1O75410 805 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 GFPT2O94808 682 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 OAZ2O95190 189 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 FAM163BP0C2L3 166 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 CTSAP10619 480 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 SKILP12757 684 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 RPL17P18621 184 aaKnown RBP11.69□□□□□ -0.54
TOP3A-216ENST00000583804 WARSP23381 471 aaKnown RBP11.69□□□□□ -0.54
TOP3A-216ENST00000583804 ACAT1P24752 427 aaKnown RBP11.69□□□□□ -0.54
TOP3A-216ENST00000583804 LMO2P25791 158 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 ARPP19P56211 112 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 GSDMDP57764 484 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 YWHAEP62258 255 aaKnown RBP11.69□□□□□ -0.54
TOP3A-216ENST00000583804 GCNT1Q02742 428 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 SMC1AQ14683 1233 aaKnown RBP11.69□□□□□ -0.54
TOP3A-216ENST00000583804 DRAP1Q14919 205 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-216ENST00000583804 PSMD5Q16401 504 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 ZNF280DQ6N043 979 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 ANKS3Q6ZW76 656 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 LIMS2Q7Z4I7 341 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 LNX1Q8TBB1 728 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-216ENST00000583804 KBTBD7Q8WVZ9 684 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 PIK3R5Q8WYR1 880 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 BAP1Q92560 729 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 TTYH1Q9H313 450 aaPredicted RBP11.69□□□□□ -0.54
TOP3A-216ENST00000583804 PRDM12Q9H4Q4 367 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 NGRNQ9NPE2 291 aaKnown RBP11.69□□□□□ -0.54
TOP3A-216ENST00000583804 PCDHB4Q9Y5E5 795 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 PCDHGC5Q9Y5F6 944 aa11.69□□□□□ -0.54
TOP3A-216ENST00000583804 LAMA3Q16787 3333 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-216ENST00000583804 SOWAHDA6NJG2 315 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 HCRTO43612 131 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 PLEKP08567 350 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-216ENST00000583804 KRT5P13647 590 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 SSTR3P32745 418 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-216ENST00000583804 IRS1P35568 1242 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 NDST1P52848 882 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 ZBED6P86452 979 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 ORC1Q13415 861 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 CAMK1Q14012 370 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 MRPL58Q14197 206 aaKnown RBP11.68□□□□□ -0.54
TOP3A-216ENST00000583804 MTF1Q14872 753 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 GRIN2CQ14957 1233 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 ASIC2Q16515 512 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 PTPROQ16827 1216 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 ZNF394Q53GI3 561 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 CNGA4Q8IV77 575 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 GLYCTKQ8IVS8 523 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 LRRC8AQ8IWT6 810 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 C17orf53Q8N3J3 647 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-216ENST00000583804 TTC39CQ8N584 583 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 MRPL43Q8N983 215 aaKnown RBP11.68□□□□□ -0.54
TOP3A-216ENST00000583804 SPATA18Q8TC71 538 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 STK33Q9BYT3 514 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 LMAN2LQ9H0V9 348 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 FBXL5Q9UKA1 691 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 PYCARDQ9ULZ3 195 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 BARX2Q9UMQ3 279 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-216ENST00000583804 STXBP5LQ9Y2K9 1186 aa11.68□□□□□ -0.54
TOP3A-216ENST00000583804 LAMA2P24043 3122 aaKnown RBP11.68□□□□□ -0.54
TOP3A-216ENST00000583804 HIDE1A8MVS5 230 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 F8VZ95 297 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 GABRDO14764 452 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 LILRB3O75022 631 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 CILPO75339 1184 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 RFX1P22670 979 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 PCSK1P29120 753 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 OR1D2P34982 312 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 CDR1P51861 262 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 TSPY1Q01534 308 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 INCA1Q0VD86 236 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 PTPN14Q15678 1187 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 TDRD12Q587J7 1177 aaKnown RBP11.67□□□□□ -0.54
TOP3A-216ENST00000583804 SFMBT2Q5VUG0 894 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 PDE12Q6L8Q7 609 aaKnown RBP11.67□□□□□ -0.54
TOP3A-216ENST00000583804 TMEM270Q6UE05 265 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 RSPO2Q6UXX9 243 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-216ENST00000583804 ACOT1Q86TX2 421 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 ZNF397Q8NF99 534 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-216ENST00000583804 OR10T2Q8NGX3 314 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 JAKMIP2Q96AA8 810 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 CHP1Q99653 195 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 BAG1Q99933 345 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-216ENST00000583804 RTP3Q9BQQ7 232 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 SYT15Q9BQS2 421 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 NT5C1AQ9BXI3 368 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 EMILIN2Q9BXX0 1053 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 GPR88Q9GZN0 384 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 DNAI2Q9GZS0 605 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 ACP6Q9NPH0 428 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.67□□□□□ -0.54
TOP3A-216ENST00000583804 MTRRQ9UBK8 725 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 HMGXB4Q9UGU5 601 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 NME7Q9Y5B8 376 aa11.67□□□□□ -0.54
TOP3A-216ENST00000583804 BACE2Q9Y5Z0 518 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms