RNA–Protein interactions for RNA: ENST00000583441.1

SMCHD1-209, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 657 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-209ENST00000583441 TPD52L2O43399 206 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 PQBP1O60828 265 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 GNAI3P08754 354 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 RAP2AP10114 183 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 ITGAMP11215 1152 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 ALAS1P13196 640 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 ATP5JP18859 108 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 PCSK1P29120 753 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 AK2P54819 239 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 ZNF280AP59817 542 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 GNAI1P63096 354 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 PLS1Q14651 629 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 PABPC1LQ4VXU2 614 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 IL31Q6EBC2 164 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 SEM1Q6ZVN7 128 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 FAM83AQ86UY5 434 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 AOPEPQ8N6M6 819 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 REPS2Q8NFH8 660 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 NLGN4YQ8NFZ3 816 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 DDB2Q92466 427 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 RAB24Q969Q5 203 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 SUCLG2Q96I99 432 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 ZC3H10Q96K80 434 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 STRBPQ96SI9 672 aaKnown RBP4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 VRK1Q99986 396 aaPredicted RBP4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 KLK15Q9H2R5 256 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 LDAHQ9H6V9 325 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 KLHL11Q9NVR0 708 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 WWOXQ9NZC7 414 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 ZDHHC8Q9ULC8 765 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 TPCN1Q9ULQ1 816 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 LRP12Q9Y561 859 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 ATRNL1Q5VV63 1379 aa4.62□□□□□ -1.67
SMCHD1-209ENST00000583441 ISM1B1AKI9 464 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 NT5C1B-RDH14C9J2C7 533 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 HOXA3O43365 443 aaPredicted RBP4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 CD1AP06126 327 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 CELA2AP08217 269 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 PRDX5P30044 214 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 HTR3AP46098 478 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 ALDH1A3P47895 512 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 PIK3CGP48736 1102 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 NEK3P51956 506 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 SNAPC2Q13487 334 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 MORC3Q14149 939 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 FLYWCH1Q4VC44 716 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 GORABQ5T7V8 394 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 EMC10Q5UCC4 262 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 AFMIDQ63HM1 303 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 DOK3Q7L591 496 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 OR52N2Q8NGI0 321 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 PLBD2Q8NHP8 589 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 GJA10Q969M2 543 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 APIPQ96GX9 242 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 SLC39A13Q96H72 371 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 PACSIN1Q9BY11 444 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 BHMT2Q9H2M3 363 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 MYH16Q9H6N6 1097 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 NLRC4Q9NPP4 1024 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 CHST12Q9NRB3 414 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 RLIMQ9NVW2 624 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 PIH1D1Q9NWS0 290 aaKnown RBP4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 FAM30AQ9NZY2 134 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 PHTF1Q9UMS5 762 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 HDAC5Q9UQL6 1122 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 ACTL7AQ9Y615 435 aa4.61□□□□□ -1.67
SMCHD1-209ENST00000583441 CXorf49A8MYA2 514 aaPredicted RBP4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 F2RL2O00254 374 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 ANXA1P04083 346 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 MYF5P13349 255 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 SLC5A1P13866 664 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 FPR1P21462 350 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 TM4SF4P48230 202 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 FOXG1P55316 489 aaPredicted RBP4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 MFSD14BQ5SR56 506 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 C11orf87Q6NUJ2 197 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 SWSAP1Q6NVH7 229 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 APOA5Q6Q788 366 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 PTF1AQ7RTS3 328 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 FAM90A1Q86YD7 464 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 IL17RDQ8NFM7 739 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 ZFP28Q8NHY6 868 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 KBTBD7Q8WVZ9 684 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 MYD88Q99836 296 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 MRI1Q9BV20 369 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 CPEB1Q9BZB8 566 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 C22orf23Q9BZE7 217 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 ARMT1Q9H993 441 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 ZMAT3Q9HA38 289 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 CFAP97Q9P2B7 532 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 SLC17A6Q9P2U8 582 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 RUVBL1Q9Y265 456 aaKnown RBP4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 CHST2Q9Y4C5 530 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 PCDHGB6Q9Y5F9 930 aa4.6□□□□□ -1.67
SMCHD1-209ENST00000583441 PRR5-ARHGAP8B1AHC4 643 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 MGST3O14880 152 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 GRM6O15303 877 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 HAUS5O94927 633 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 SPDEFO95238 335 aa4.59□□□□□ -1.67
SMCHD1-209ENST00000583441 NTN1O95631 604 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms