RNA–Protein interactions for RNA: ENST00000582980.1

CDH8-208, Transcript of cadherin 8, humanhuman

TSL 5

Gene CDH8, Length 376 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-208ENST00000582980 RTP2Q5QGT7 225 aa13.21□□□□□ -0.29
CDH8-208ENST00000582980 TAS1R1Q7RTX1 841 aa13.21□□□□□ -0.29
CDH8-208ENST00000582980 OSTM1Q86WC4 334 aa13.21□□□□□ -0.29
CDH8-208ENST00000582980 OR8K1Q8NGG5 319 aa13.21□□□□□ -0.29
CDH8-208ENST00000582980 POF1BQ8WVV4 589 aa13.21□□□□□ -0.29
CDH8-208ENST00000582980 RIN2Q8WYP3 895 aaPredicted RBP13.21□□□□□ -0.29
CDH8-208ENST00000582980 TMEM176AQ96HP8 235 aa13.21□□□□□ -0.29
CDH8-208ENST00000582980 ACBD6Q9BR61 282 aa13.21□□□□□ -0.29
CDH8-208ENST00000582980 ZBP1Q9H171 429 aa13.21□□□□□ -0.29
CDH8-208ENST00000582980 TLR9Q9NR96 1032 aa13.21□□□□□ -0.29
CDH8-208ENST00000582980 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.21□□□□□ -0.29
CDH8-208ENST00000582980 MRPL17Q9NRX2 175 aaKnown RBP13.21□□□□□ -0.29
CDH8-208ENST00000582980 H3BNC9 293 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 C2CD2LO14523 706 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 LPXNO60711 386 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 GFPT2O94808 682 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 PDGFRBP09619 1106 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 PNMA6AP0CW24 399 aaPredicted RBP13.2□□□□□ -0.3
CDH8-208ENST00000582980 CTSAP10619 480 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 PDE6CP51160 858 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 ZNF132P52740 706 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 RAD23BP54727 409 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 CCDC173Q0VFZ6 552 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 ARID5BQ14865 1188 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 MAPRE1Q15691 268 aaKnown RBP13.2□□□□□ -0.3
CDH8-208ENST00000582980 PSMD5Q16401 504 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 PDE12Q6L8Q7 609 aaKnown RBP13.2□□□□□ -0.3
CDH8-208ENST00000582980 TMC7Q7Z402 723 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 B3GALNT2Q8NCR0 500 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 SPPL3Q8TCT6 385 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 ARNTL2Q8WYA1 636 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 B3GALT6Q96L58 329 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 TCF25Q9BQ70 676 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 SYT15Q9BQS2 421 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 ELOVL4Q9GZR5 314 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 LMAN2LQ9H0V9 348 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 ALG13Q9NP73 1137 aaKnown RBP13.2□□□□□ -0.3
CDH8-208ENST00000582980 ENTPD7Q9NQZ7 604 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 ABHD10Q9NUJ1 306 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 AIPL1Q9NZN9 384 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 MTRRQ9UBK8 725 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 HMGXB4Q9UGU5 601 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 KIAA1257Q9ULG3 409 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 BACE2Q9Y5Z0 518 aa13.2□□□□□ -0.3
CDH8-208ENST00000582980 RANBP2P49792 3224 aaKnown RBP13.19□□□□□ -0.3
CDH8-208ENST00000582980 TMEM265A0A087WTH1 108 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 RNF225M0QZC1 329 aaPredicted RBP13.19□□□□□ -0.3
CDH8-208ENST00000582980 CYP26A1O43174 497 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 MED7O43513 233 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 CD19P15391 556 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 PTPN1P18031 435 aaKnown RBP13.19□□□□□ -0.3
CDH8-208ENST00000582980 ACAT1P24752 427 aaKnown RBP13.19□□□□□ -0.3
CDH8-208ENST00000582980 LMO2P25791 158 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 GNA15P30679 374 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 CA8P35219 290 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 ADKP55263 362 aaKnown RBP13.19□□□□□ -0.3
CDH8-208ENST00000582980 ARID5AQ03989 594 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 SMARCB1Q12824 385 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 SMC1AQ14683 1233 aaKnown RBP13.19□□□□□ -0.3
CDH8-208ENST00000582980 STILQ15468 1287 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 INTS6LQ5JSJ4 861 aaKnown RBP13.19□□□□□ -0.3
CDH8-208ENST00000582980 KIAA0319Q5VV43 1072 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 SPRED2Q7Z698 418 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 ACOT1Q86TX2 421 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 DCP1BQ8IZD4 617 aaKnown RBP13.19□□□□□ -0.3
CDH8-208ENST00000582980 CRYBG2Q8N1P7 616 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 SLC4A11Q8NBS3 891 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 OR10T2Q8NGX3 314 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 LNX1Q8TBB1 728 aaPredicted RBP13.19□□□□□ -0.3
CDH8-208ENST00000582980 WHAMMQ8TF30 809 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 PDLIM2Q96JY6 352 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 HEXIM2Q96MH2 286 aaKnown RBP13.19□□□□□ -0.3
CDH8-208ENST00000582980 PANX2Q96RD6 677 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 TWNKQ96RR1 684 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 DNAJC7Q99615 494 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 RTP3Q9BQQ7 232 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 CERS4Q9HA82 394 aa13.19□□□□□ -0.3
CDH8-208ENST00000582980 NGRNQ9NPE2 291 aaKnown RBP13.19□□□□□ -0.3
CDH8-208ENST00000582980 BZW2Q9Y6E2 419 aaKnown RBP13.19□□□□□ -0.3
CDH8-208ENST00000582980 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP13.18□□□□□ -0.3
CDH8-208ENST00000582980 GRM6O15303 877 aa13.18□□□□□ -0.3
CDH8-208ENST00000582980 THAP12O43422 761 aa13.18□□□□□ -0.3
CDH8-208ENST00000582980 CXCL14O95715 111 aa13.18□□□□□ -0.3
CDH8-208ENST00000582980 PTMAP06454 111 aaKnown RBP13.18□□□□□ -0.3
CDH8-208ENST00000582980 VDRP11473 427 aa13.18□□□□□ -0.3
CDH8-208ENST00000582980 CPB1P15086 417 aa13.18□□□□□ -0.3
CDH8-208ENST00000582980 CYP11B1P15538 503 aa13.18□□□□□ -0.3
CDH8-208ENST00000582980 HNRNPH3P31942 346 aaKnown RBP13.18□□□□□ -0.3
CDH8-208ENST00000582980 CLCN1P35523 988 aa13.18□□□□□ -0.3
CDH8-208ENST00000582980 PSMC1P62191 440 aaKnown RBP13.18□□□□□ -0.3
CDH8-208ENST00000582980 KLHL30Q0D2K2 578 aa13.18□□□□□ -0.3
CDH8-208ENST00000582980 ORC1Q13415 861 aa13.18□□□□□ -0.3
CDH8-208ENST00000582980 PTPN14Q15678 1187 aa13.18□□□□□ -0.3
CDH8-208ENST00000582980 NFE2Q16621 373 aaPredicted RBP13.18□□□□□ -0.3
CDH8-208ENST00000582980 SGO2Q562F6 1265 aa13.18□□□□□ -0.3
CDH8-208ENST00000582980 SLC8B1Q6J4K2 584 aa13.18□□□□□ -0.3
CDH8-208ENST00000582980 PRSS55Q6UWB4 352 aaPredicted RBP13.18□□□□□ -0.3
CDH8-208ENST00000582980 SLC47A2Q86VL8 602 aa13.18□□□□□ -0.3
CDH8-208ENST00000582980 ZNF677Q86XU0 584 aa13.18□□□□□ -0.3
CDH8-208ENST00000582980 TC2NQ8N9U0 490 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms