RNA–Protein interactions for RNA: ENST00000581224.5

TRIM16-222, Transcript of tripartite motif containing 16, human

TSL 3

Gene TRIM16, Length 815 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
TRIM16-222	ENST00000581224	NNT	Q13423	1086 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	MTFR1	Q15390	333 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	KCNA10	Q16322	511 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	FBXO47	Q5MNV8	452 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	EMB	Q6PCB8	327 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	CXCL17	Q6UXB2	119 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	CCNI2	Q6ZMN8	369 aa	Predicted RBP	10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	ZDHHC17	Q8IUH5	632 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	GOLGA6L1	Q8N7Z2	621 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	C3orf20	Q8ND61	904 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	CXorf38	Q8TB03	319 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	SPATA18	Q8TC71	538 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	FNIP1	Q8TF40	1166 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	STK32A	Q8WU08	396 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	CD101	Q93033	1021 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	C18orf8	Q96DM3	657 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	TNIP3	Q96KP6	325 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	HEXIM2	Q96MH2	286 aa	Known RBP	10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	UNC93B1	Q9H1C4	597 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	CDHR5	Q9HBB8	845 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	HMX1	Q9NP08	348 aa	Predicted RBP	10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	DDX56	Q9NY93	547 aa	Known RBP	10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	HESX1	Q9UBX0	185 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	GIT1	Q9Y2X7	761 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	NOC2L	Q9Y3T9	749 aa	Known RBP	10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	CDY2A	Q9Y6F7	541 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	UMODL1	Q5DID0	1318 aa		10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	KIAA0100	Q14667	2235 aa	Known RBP	10.52	□□□□□ -0.73
TRIM16-222	ENST00000581224	SMIM28	A0A1B0GU29	152 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	SIGLEC16	A6NMB1	481 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	KPNA7	A9QM74	516 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	PIR	O00625	290 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	HUS1	O60921	280 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	PGK1	P00558	417 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	FGG	P02679	453 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	LRPAP1	P30533	357 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	PEX5	P50542	639 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	LMNB2	Q03252	620 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	C2orf54	Q08AI8	447 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	TRIM32	Q13049	653 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	MAMLD1	Q13495	774 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	PTGIS	Q16647	500 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	HADH	Q16836	314 aa	Known RBP	10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	FAM26D	Q5JW98	314 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	C9orf57	Q5W0N0	161 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	LCLAT1	Q6UWP7	414 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	SCARA5	Q6ZMJ2	495 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	MMS22L	Q6ZRQ5	1243 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	SYDE1	Q6ZW31	735 aa	Predicted RBP	10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	MRPL10	Q7Z7H8	261 aa	Known RBP	10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	RCOR2	Q8IZ40	523 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	KRT222	Q8N1A0	295 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	TMEM86A	Q8N2M4	240 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	TOP6BL	Q8N6T0	577 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	NIPA2	Q8N8Q9	360 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	SLC4A11	Q8NBS3	891 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	APPL2	Q8NEU8	664 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	WHAMM	Q8TF30	809 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	RSPH1	Q8WYR4	309 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	LENG1	Q96BZ8	264 aa	Predicted RBP	10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	DDX27	Q96GQ7	796 aa	Known RBP	10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	RBM41	Q96IZ5	413 aa	Known RBP	10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	MS4A14	Q96JA4	679 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	C11orf70	Q9BRQ4	267 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	LRRC1	Q9BTT6	524 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	SENP6	Q9GZR1	1112 aa	Predicted RBP	10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	SNX25	Q9H3E2	840 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	ACP6	Q9NPH0	428 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	FAM114A2	Q9NRY5	505 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	RBM12	Q9NTZ6	932 aa	Known RBP	10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	PACSIN2	Q9UNF0	486 aa	Predicted RBP	10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	WDR3	Q9UNX4	943 aa	Known RBP eCLIP	10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	UTP11	Q9Y3A2	253 aa	Known RBP	10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	IPP	Q9Y573	584 aa		10.51	□□□□□ -0.73
TRIM16-222	ENST00000581224	BRCA2	P51587	3418 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	TMEM191C	A6NGB0	347 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	TMEM110-MUSTN1	A8MSY1	372 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	RNF8	O76064	485 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	KRT7	P08729	469 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	KRT3	P12035	628 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	EN2	P19622	333 aa	Predicted RBP	10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	FGFR4	P22455	802 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	BRD2	P25440	801 aa	Known RBP	10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	ACADSB	P45954	432 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	GABRB2	P47870	512 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	DNA2	P51530	1060 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	DRG2	P55039	364 aa	Known RBP	10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	VSNL1	P62760	191 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	FAM193A	P78312	1265 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	ITGA7	Q13683	1181 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	ZNF394	Q53GI3	561 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	HSP90B2P	Q58FF3	399 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	BEND6	Q5SZJ8	279 aa	Predicted RBP	10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	UBXN11	Q5T124	520 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	ARHGAP17	Q68EM7	881 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	CCSAP	Q6IQ19	270 aa	Predicted RBP	10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	GDF6	Q6KF10	455 aa	Predicted RBP	10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	POLN	Q7Z5Q5	900 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	FAM228A	Q86W67	206 aa		10.5	□□□□□ -0.73
TRIM16-222	ENST00000581224	KATNAL2	Q8IYT4	538 aa		10.5	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms