RNA–Protein interactions for RNA: ENST00000580541.1

SKA2-205, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3 BASIC

Gene SKA2, Length 689 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-205ENST00000580541 TMC6Q7Z403 805 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 CNGA4Q8IV77 575 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 CRYBG2Q8N1P7 616 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 MRPL43Q8N983 215 aaKnown RBP15.23■□□□□ 0.03
SKA2-205ENST00000580541 LNX1Q8TBB1 728 aaPredicted RBP15.23■□□□□ 0.03
SKA2-205ENST00000580541 SHC3Q92529 594 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 TMEM176AQ96HP8 235 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 HEXIM2Q96MH2 286 aaKnown RBP15.23■□□□□ 0.03
SKA2-205ENST00000580541 KREMEN1Q96MU8 473 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 MRPL45Q9BRJ2 306 aaKnown RBP15.23■□□□□ 0.03
SKA2-205ENST00000580541 CERS4Q9HA82 394 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 ZNHIT6Q9NWK9 470 aaKnown RBP15.23■□□□□ 0.03
SKA2-205ENST00000580541 LMCD1Q9NZU5 365 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 DPP7Q9UHL4 492 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 MAFFQ9ULX9 164 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 CNTN6Q9UQ52 1028 aa15.23■□□□□ 0.03
SKA2-205ENST00000580541 FOXN3O00409 490 aaPredicted RBP15.22■□□□□ 0.03
SKA2-205ENST00000580541 C2CD2LO14523 706 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 GRM6O15303 877 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 AP5Z1O43299 807 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 MED7O43513 233 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 ARHGEF15O94989 841 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 ADH1AP07327 375 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 FERP16591 822 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 SOX5P35711 763 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 RAP1GAPP47736 663 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 STILQ15468 1287 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 RTP2Q5QGT7 225 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 SFMBT2Q5VUG0 894 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 DPY19L2P1Q6NXN4 242 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 GJB7Q6PEY0 223 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 ELMSAN1Q6PJG2 1045 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 C4orf50Q6ZRC1 276 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 C2orf15Q8WU43 125 aaKnown RBP15.22■□□□□ 0.03
SKA2-205ENST00000580541 CPLX3Q8WVH0 158 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 KBTBD7Q8WVZ9 684 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 SYN2Q92777 582 aaPredicted RBP15.22■□□□□ 0.03
SKA2-205ENST00000580541 ELMO3Q96BJ8 720 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 RXFP1Q9HBX9 757 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 MTRRQ9UBK8 725 aa15.22■□□□□ 0.03
SKA2-205ENST00000580541 BZW2Q9Y6E2 419 aaKnown RBP15.22■□□□□ 0.03
SKA2-205ENST00000580541 TRIOBPQ9H2D6 2365 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 ATP8B3O60423 1300 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 F8VZ95 297 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 VDRP11473 427 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 PTPN1P18031 435 aaKnown RBP15.21■□□□□ 0.03
SKA2-205ENST00000580541 ACO1P21399 889 aaKnown RBP15.21■□□□□ 0.03
SKA2-205ENST00000580541 NDUFV1P49821 464 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 SLC8A3P57103 927 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 APBA1Q02410 837 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 TPGS2Q68CL5 300 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 SLC8B1Q6J4K2 584 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 FAM71AQ8IYT1 594 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 RBBP8NLQ8NC74 664 aaPredicted RBP15.21■□□□□ 0.03
SKA2-205ENST00000580541 B3GALNT2Q8NCR0 500 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 OR8K1Q8NGG5 319 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 MRPL38Q96DV4 380 aaKnown RBP15.21■□□□□ 0.03
SKA2-205ENST00000580541 ARID3AQ99856 593 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 SYT15Q9BQS2 421 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 VN1R3Q9BXE9 311 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 SDCBP2Q9H190 292 aa15.21■□□□□ 0.03
SKA2-205ENST00000580541 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP15.2■□□□□ 0.02
SKA2-205ENST00000580541 AKR1B15C9JRZ8 316 aaPredicted RBP15.2■□□□□ 0.02
SKA2-205ENST00000580541 FSCN2O14926 492 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 LILRB3O75022 631 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 CPB1P15086 417 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 LMO2P25791 158 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 KLRC2P26717 231 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 CASP14P31944 242 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 ELF1P32519 619 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 OR1D2P34982 312 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 KRT9P35527 623 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 RAD23BP54727 409 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 JAM2P57087 298 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 ERVFC1P60507 584 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 GPR17Q13304 367 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 PTPN14Q15678 1187 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 ZNF394Q53GI3 561 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 SGO2Q562F6 1265 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 INTS6LQ5JSJ4 861 aaKnown RBP15.2■□□□□ 0.02
SKA2-205ENST00000580541 PRSS55Q6UWB4 352 aaPredicted RBP15.2■□□□□ 0.02
SKA2-205ENST00000580541 ACOT1Q86TX2 421 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 UBR7Q8N806 425 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 MYCBPAPQ8TBZ2 947 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 KAT5Q92993 513 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 B3GALT6Q96L58 329 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 TTYH3Q9C0H2 523 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 ZCWPW1Q9H0M4 648 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 AIPL1Q9NZN9 384 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 CDY1Q9Y6F8 540 aa15.2■□□□□ 0.02
SKA2-205ENST00000580541 RANBP2P49792 3224 aaKnown RBP15.19■□□□□ 0.02
SKA2-205ENST00000580541 C2orf71A6NGG8 1288 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 EPHB6O15197 1021 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 CYP26A1O43174 497 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 TBC1D4O60343 1298 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 GYPCP04921 128 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 CD19P15391 556 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 PDE6CP51160 858 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 ARPP19P56211 112 aa15.19■□□□□ 0.02
SKA2-205ENST00000580541 GSDMDP57764 484 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms