RNA–Protein interactions for RNA: ENST00000580533.1

SNORD3C-201, Transcript of small nucleolar RNA, C/D box 3C, humanhuman

BASIC

Gene SNORD3C, Length 581 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3C-201ENST00000580533 NLRC4Q9NPP4 1024 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 MTRRQ9UBK8 725 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 CAPN11Q9UMQ6 739 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 STXBP5LQ9Y2K9 1186 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 FHOD1Q9Y613 1164 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 IRAK3Q9Y616 596 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 NLRC5Q86WI3 1866 aa12.53□□□□□ -0.4
SNORD3C-201ENST00000580533 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 F8VZ95 297 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 F8W810 466 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 SRGAP2BP0DMP2 458 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 CPB1P15086 417 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 FERP16591 822 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 SOX5P35711 763 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 PDE6CP51160 858 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 NDST1P52848 882 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 GSDMDP57764 484 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 MRPL58Q14197 206 aaKnown RBP12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 RTP2Q5QGT7 225 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 SFMBT2Q5VUG0 894 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 VPS36Q86VN1 386 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 RBBP8NLQ8NC74 664 aaPredicted RBP12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 B3GALNT2Q8NCR0 500 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 KBTBD7Q8WVZ9 684 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 SYN2Q92777 582 aaPredicted RBP12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 SYT15Q9BQS2 421 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 MRPL45Q9BRJ2 306 aaKnown RBP12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 ALG13Q9NP73 1137 aaKnown RBP12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 LMCD1Q9NZU5 365 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 CNTN6Q9UQ52 1028 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 CEP83Q9Y592 693 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 TIMM13Q9Y5L4 95 aaPredicted RBP12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 BZW2Q9Y6E2 419 aaKnown RBP12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 KIAA1671Q9BY89 1806 aa12.52□□□□□ -0.41
SNORD3C-201ENST00000580533 GBF1Q92538 1859 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 AKR1B15C9JRZ8 316 aaPredicted RBP12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 C2CD2LO14523 706 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 TNRC18O15417 2968 aaPredicted RBP12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 LRRN2O75325 713 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 NOL4O94818 638 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 CXCL14O95715 111 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 VDRP11473 427 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 RAP1GAPP47736 663 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 KLK7P49862 253 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 CDH8P55286 799 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 JAM2P57087 298 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 PTPN14Q15678 1187 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 SGO2Q562F6 1265 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 INTS6LQ5JSJ4 861 aaKnown RBP12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 KIAA0319Q5VV43 1072 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 TPGS2Q68CL5 300 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 SLC8B1Q6J4K2 584 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 PPP1R2P3Q6NXS1 205 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 ZNF677Q86XU0 584 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 FAM71AQ8IYT1 594 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 CRYBG2Q8N1P7 616 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 LNX1Q8TBB1 728 aaPredicted RBP12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 MRPL38Q96DV4 380 aaKnown RBP12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 FUBP3Q96I24 572 aaKnown RBP eCLIP12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 HEXIM2Q96MH2 286 aaKnown RBP12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 KREMEN1Q96MU8 473 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 CDCA3Q99618 268 aaPredicted RBP12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 ARID3AQ99856 593 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 TTYH3Q9C0H2 523 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 RXFP1Q9HBX9 757 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 HESX1Q9UBX0 185 aa12.51□□□□□ -0.41
SNORD3C-201ENST00000580533 SCN1AP35498 2009 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 FSCN2O14926 492 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 PDGFRBP09619 1106 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 CD19P15391 556 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 PTPN1P18031 435 aaKnown RBP12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 ACO1P21399 889 aaKnown RBP12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 GNA15P30679 374 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 CASP14P31944 242 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 ELF1P32519 619 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 KRT9P35527 623 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 TERF1P54274 439 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 ASIC2Q16515 512 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 MEA1Q16626 185 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 PLPP4Q5VZY2 271 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 GJB7Q6PEY0 223 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 RTL10Q7L3V2 364 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 SPATA2LQ8IUW3 424 aaPredicted RBP12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 TMEM130Q8N3G9 435 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 UBR7Q8N806 425 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 MRPL43Q8N983 215 aaKnown RBP12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 OR8K1Q8NGG5 319 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 MYCBPAPQ8TBZ2 947 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 SPPL2BQ8TCT7 592 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 CPLX3Q8WVH0 158 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 GAS2L1Q99501 681 aaPredicted RBP12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 VN1R3Q9BXE9 311 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 ZCWPW1Q9H0M4 648 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 PDCL3Q9H2J4 239 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 CERS4Q9HA82 394 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 ABCB6Q9NP58 842 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 HSFX1Q9UBD0 423 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 CDY1Q9Y6F8 540 aa12.5□□□□□ -0.41
SNORD3C-201ENST00000580533 LRRC53A6NM62 1247 aa12.49□□□□□ -0.41
SNORD3C-201ENST00000580533 FOXN3O00409 490 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms