RNA–Protein interactions for RNA: ENST00000580095.5

TOP3A-209, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 1 (best)

Gene TOP3A, Length 2,929 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-209ENST00000580095 LRRN4Q8WUT4 740 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 TCP11Q8WWU5 503 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 FAXDC2Q96IV6 333 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 TMEM109Q9BVC6 243 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 HOMER3Q9NSC5 361 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 HMGXB4Q9UGU5 601 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 CYTH4Q9UIA0 394 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 PNMA3Q9UL41 463 aa11.08□□□□□ -0.64
TOP3A-209ENST00000580095 RASA4BC9J798 803 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 RASA4O43374 803 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 FAM189A1O60320 539 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 ATG7O95352 703 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 RAB6CQ53S08 254 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 PNMA8AQ86V59 439 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-209ENST00000580095 CEP57Q86XR8 500 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 KIAA0319LQ8IZA0 1049 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 KIF2BQ8N4N8 673 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 SERPINB12Q96P63 405 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 RAB6CQ9H0N0 254 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 STMN4Q9H169 189 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-209ENST00000580095 C12orf65Q9H3J6 166 aaKnown RBP11.07□□□□□ -0.64
TOP3A-209ENST00000580095 MINDY3Q9H8M7 445 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 VPS37BQ9H9H4 285 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 GGA2Q9UJY4 613 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 TRIM33Q9UPN9 1127 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 ECM2O94769 699 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-209ENST00000580095 UBOX5O94941 541 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 PRKCBP05771 671 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 CXCL8P10145 99 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 TBXAS1P24557 533 aaPredicted RBP11.07□□□□□ -0.64
TOP3A-209ENST00000580095 IL1R2P27930 398 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 GDF10P55107 478 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 C1QBPQ07021 282 aaKnown RBP11.07□□□□□ -0.64
TOP3A-209ENST00000580095 E2F5Q15329 346 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 TARBP2Q15633 366 aaKnown RBP11.07□□□□□ -0.64
TOP3A-209ENST00000580095 ZNF699Q32M78 642 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 WDR72Q3MJ13 1102 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 SPOCD1Q6ZMY3 1216 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 ERICH1Q86X53 443 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 ZBED8Q8IZ13 594 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 C3orf20Q8ND61 904 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 PPP1R13LQ8WUF5 828 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 OTUD5Q96G74 571 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 C12orf42Q96LP6 360 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 TGS1Q96RS0 853 aaKnown RBP11.07□□□□□ -0.64
TOP3A-209ENST00000580095 NRBP2Q9NSY0 501 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 RNF19AQ9NV58 838 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.07□□□□□ -0.64
TOP3A-209ENST00000580095 IP6K2Q9UHH9 426 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 SCINQ9Y6U3 715 aa11.07□□□□□ -0.64
TOP3A-209ENST00000580095 MYH9P35579 1960 aaKnown RBP11.06□□□□□ -0.64
TOP3A-209ENST00000580095 EXOC1LA0A1B0GW35 172 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 SNX3O60493 162 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 TOM1L1O75674 476 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 IQCF3P0C7M6 154 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 STX2P32856 288 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 EFTUD2Q15029 972 aaKnown RBP eCLIP11.06□□□□□ -0.64
TOP3A-209ENST00000580095 TRPM8Q7Z2W7 1104 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 BRSK2Q8IWQ3 736 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 FBXO16Q8IX29 292 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-209ENST00000580095 MAIP1Q8WWC4 291 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 CLMNQ96JQ2 1002 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 NIFKQ9BYG3 293 aaKnown RBP11.06□□□□□ -0.64
TOP3A-209ENST00000580095 ROPN1BQ9BZX4 212 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-209ENST00000580095 ROPN1Q9HAT0 212 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-209ENST00000580095 AGTPBP1Q9UPW5 1226 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 ADM5C9JUS6 153 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 FZD9O00144 591 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 NOP56O00567 594 aaKnown RBP11.06□□□□□ -0.64
TOP3A-209ENST00000580095 ASAP2O43150 1006 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 USP2O75604 605 aaPredicted RBP11.06□□□□□ -0.64
TOP3A-209ENST00000580095 MAP3K6O95382 1288 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 LDHAP00338 332 aaKnown RBP11.06□□□□□ -0.64
TOP3A-209ENST00000580095 FOXN2P32314 431 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 ZNF132P52740 706 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 PKN2Q16513 984 aaKnown RBP11.06□□□□□ -0.64
TOP3A-209ENST00000580095 DUOXA2Q1HG44 320 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 PTPN20Q4JDL3 420 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 ARFGAP1Q8N6T3 406 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 TBC1D31Q96DN5 1066 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 RMDN2Q96LZ7 410 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 ACO2Q99798 780 aaKnown RBP11.06□□□□□ -0.64
TOP3A-209ENST00000580095 MRPL4Q9BYD3 311 aaKnown RBP11.06□□□□□ -0.64
TOP3A-209ENST00000580095 NIF3L1Q9GZT8 377 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 SNCAIPQ9Y6H5 919 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 BRCA2P51587 3418 aa11.06□□□□□ -0.64
TOP3A-209ENST00000580095 ANKRD33BA6NCL7 494 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 ATP2A1O14983 1001 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 PIGRP01833 764 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 PSMA2P25787 234 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 KCNJ2P63252 427 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 SARNPP82979 210 aaKnown RBP11.05□□□□□ -0.64
TOP3A-209ENST00000580095 LACTBP83111 547 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-209ENST00000580095 MAPK6Q16659 721 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 SH3PXD2AQ5TCZ1 1133 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 ANKRD22Q5VYY1 191 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 NAIF1Q69YI7 327 aaPredicted RBP11.05□□□□□ -0.64
TOP3A-209ENST00000580095 LBX2Q6XYB7 198 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 TRIM72Q6ZMU5 477 aa11.05□□□□□ -0.64
TOP3A-209ENST00000580095 ARMC9Q7Z3E5 817 aa11.05□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms