RNA–Protein interactions for RNA: ENST00000580073.1

TRAF4-214, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 449 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-214ENST00000580073 BPIFB1Q8TDL5 484 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 HVCN1Q96D96 273 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 SENP8Q96LD8 212 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 SEPT5Q99719 369 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-214ENST00000580073 DNAJC25Q9H1X3 360 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 KIF9Q9HAQ2 790 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 CPSF3Q9UKF6 684 aaKnown RBP14.45□□□□□ -0.1
TRAF4-214ENST00000580073 CIZ1Q9ULV3 898 aaPredicted RBP14.45□□□□□ -0.1
TRAF4-214ENST00000580073 EML5Q05BV3 1969 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 ANAPC1Q9H1A4 1944 aa14.45□□□□□ -0.1
TRAF4-214ENST00000580073 A0A0B4J269 797 aa14.44□□□□□ -0.1
TRAF4-214ENST00000580073 MYBPHLA2RUH7 354 aa14.44□□□□□ -0.1
TRAF4-214ENST00000580073 SHISA7A6NL88 538 aa14.44□□□□□ -0.1
TRAF4-214ENST00000580073 SPECC1L-ADORA2AF8WAN1 911 aa14.44□□□□□ -0.1
TRAF4-214ENST00000580073 FAM189A1O60320 539 aa14.44□□□□□ -0.1
TRAF4-214ENST00000580073 PNPLA4P41247 253 aa14.44□□□□□ -0.1
TRAF4-214ENST00000580073 SV2CQ496J9 727 aa14.44□□□□□ -0.1
TRAF4-214ENST00000580073 C9orf57Q5W0N0 161 aa14.44□□□□□ -0.1
TRAF4-214ENST00000580073 DNAJB7Q7Z6W7 309 aaPredicted RBP14.44□□□□□ -0.1
TRAF4-214ENST00000580073 DCP1BQ8IZD4 617 aaKnown RBP14.44□□□□□ -0.1
TRAF4-214ENST00000580073 DDX1Q92499 740 aaKnown RBP14.44□□□□□ -0.1
TRAF4-214ENST00000580073 LRRC3Q9BY71 257 aa14.44□□□□□ -0.1
TRAF4-214ENST00000580073 CCSER1Q9C0I3 900 aa14.44□□□□□ -0.1
TRAF4-214ENST00000580073 ZHX3Q9H4I2 956 aa14.44□□□□□ -0.1
TRAF4-214ENST00000580073 TASP1Q9H6P5 420 aa14.44□□□□□ -0.1
TRAF4-214ENST00000580073 BLOC1S4Q9NUP1 217 aa14.44□□□□□ -0.1
TRAF4-214ENST00000580073 DNAH14Q0VDD8 3507 aa14.44□□□□□ -0.1
TRAF4-214ENST00000580073 GPR179Q6PRD1 2367 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 NPHP3-ACAD11A0A0J9YXS1 232 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 SOBPA7XYQ1 873 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 PIRO00625 290 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 CUTAO60888 179 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 IL18RAPO95256 599 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 PLCG1P19174 1290 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 ATXN1P54253 815 aaKnown RBP14.43□□□□□ -0.1
TRAF4-214ENST00000580073 TSPY1Q01534 308 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 SATB1Q01826 763 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 SPEM2Q0P670 501 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 POSTNQ15063 836 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 ITPRIPL2Q3MIP1 535 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 SLC39A12Q504Y0 691 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 ADALQ6DHV7 355 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 POTEHQ6S545 545 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 ATAD1Q8NBU5 361 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 LARP4BQ92615 738 aaKnown RBP14.43□□□□□ -0.1
TRAF4-214ENST00000580073 RAD54LQ92698 747 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 PANK2Q9BZ23 570 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 HAPLN2Q9GZV7 340 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 ZCWPW1Q9H0M4 648 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 CHMP5Q9NZZ3 219 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 UXTQ9UBK9 157 aaPredicted RBP14.43□□□□□ -0.1
TRAF4-214ENST00000580073 CFAP45Q9UL16 551 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 EXOC7Q9UPT5 735 aa14.43□□□□□ -0.1
TRAF4-214ENST00000580073 NCANO14594 1321 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 ATG13O75143 517 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 VNN2O95498 520 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 NFICP08651 508 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 HOXA6P31267 233 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 AVPR1AP37288 418 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 TXLNAP40222 546 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 KRT85P78386 507 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 GTF2BQ00403 316 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 BFSP1Q12934 665 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 DHX8Q14562 1220 aaKnown RBP14.42□□□□□ -0.1
TRAF4-214ENST00000580073 ARSHQ5FYA8 562 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 GAREM2Q75VX8 874 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 CEP68Q76N32 757 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 PYM1Q9BRP8 204 aaKnown RBP14.42□□□□□ -0.1
TRAF4-214ENST00000580073 CRISPLD1Q9H336 500 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 ST6GALNAC4Q9H4F1 302 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 SEL1LQ9UBV2 794 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 AGO2Q9UKV8 859 aaKnown RBP14.42□□□□□ -0.1
TRAF4-214ENST00000580073 SLC27A5Q9Y2P5 690 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 PTPRDP23468 1912 aa14.42□□□□□ -0.1
TRAF4-214ENST00000580073 ANO9A1A5B4 782 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 CYB561D2O14569 222 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 GUCY2FP51841 1108 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 GRSF1Q12849 480 aaKnown RBP eCLIP14.41□□□□□ -0.1
TRAF4-214ENST00000580073 MCM6Q14566 821 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 PON2Q15165 354 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 CSRP2Q16527 193 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 NFE2Q16621 373 aaPredicted RBP14.41□□□□□ -0.1
TRAF4-214ENST00000580073 STXBP5Q5T5C0 1151 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 CC2D1AQ6P1N0 951 aaPredicted RBP14.41□□□□□ -0.1
TRAF4-214ENST00000580073 PRR23CQ6ZRP0 262 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 OR10T2Q8NGX3 314 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 POMGNT1Q8WZA1 660 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 SPATA32Q96LK8 384 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 DPP3Q9NY33 737 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 STK17AQ9UEE5 414 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 CCDC39Q9UFE4 941 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 PCDHB5Q9Y5E4 795 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 WDR87Q6ZQQ6 2873 aa14.41□□□□□ -0.1
TRAF4-214ENST00000580073 ATG2BQ96BY7 2078 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 CCDC163A0A0D9SF12 145 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 CHURC1-FNTBB4DL54 471 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 SLC30A4O14863 429 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 LDHAP00338 332 aaKnown RBP14.4□□□□□ -0.1
TRAF4-214ENST00000580073 CSH1P0DML2 217 aa14.4□□□□□ -0.1
TRAF4-214ENST00000580073 CSH2P0DML3 217 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms