RNA–Protein interactions for RNA: ENST00000579716.2

COPS3-216, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 2

Gene COPS3, Length 419 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-216ENST00000579716 RXFP3Q9NSD7 469 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 NMRK1Q9NWW6 199 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 RTEL1Q9NZ71 1219 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 COX16Q9P0S2 106 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 VPS18Q9P253 973 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 MALT1Q9UDY8 824 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 FBXO40Q9UH90 709 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 SRP68Q9UHB9 627 aaKnown RBP6.99□□□□□ -1.29
COPS3-216ENST00000579716 ATPIF1Q9UII2 106 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 SESN1Q9Y6P5 492 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 MYO3BQ8WXR4 1341 aa6.99□□□□□ -1.29
COPS3-216ENST00000579716 KDRP35968 1356 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 CTAGE15A4D2H0 777 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 C16orf96A6NNT2 1141 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 A6NNZ2 444 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 NOTOA8MTQ0 251 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 K7ESF4 209 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 PSMD9O00233 223 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 MAGEB3O15480 346 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 SULT1B1O43704 296 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 FMO6PO60774 539 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 SMPD2O60906 423 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 PRKD3O94806 890 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 KCNH1O95259 989 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 SGPL1O95470 568 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 PLGP00747 810 aaPredicted RBP6.98□□□□□ -1.29
COPS3-216ENST00000579716 ATP5BP06576 529 aaKnown RBP6.98□□□□□ -1.29
COPS3-216ENST00000579716 CTAGE8P0CG41 777 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 SRGAP2CP0DJJ0 459 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 IL11P20809 199 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 CDH3P22223 829 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 GDI1P31150 447 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 IARSP41252 1262 aaKnown RBP6.98□□□□□ -1.29
COPS3-216ENST00000579716 TECP42680 631 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 TUBP50607 506 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 KPNA1P52294 538 aaPredicted RBP6.98□□□□□ -1.29
COPS3-216ENST00000579716 ARF3P61204 181 aaPredicted RBP6.98□□□□□ -1.29
COPS3-216ENST00000579716 DLG4P78352 724 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 ARF1P84077 181 aaKnown RBP6.98□□□□□ -1.29
COPS3-216ENST00000579716 HTD2P86397 168 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 CETN1Q12798 172 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 TRPC3Q13507 836 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 MAPKAPK3Q16644 382 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 ZNF674Q2M3X9 581 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 C2orf76Q3KRA6 126 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 TCTE1Q5JU00 501 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 UBXN11Q5T124 520 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 PM20D1Q6GTS8 502 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 TTBK2Q6IQ55 1244 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 TMEM154Q6P9G4 183 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 LRSAM1Q6UWE0 723 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 LMBR1LQ6UX01 489 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 C6orf15Q6UXA7 325 aaPredicted RBP6.98□□□□□ -1.29
COPS3-216ENST00000579716 CEP128Q6ZU80 1094 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 SV2BQ7L1I2 683 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 CTAGE6Q86UF2 777 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 CTAGE4Q8IX94 777 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 CNTROBQ8N137 903 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 FAM156AQ8NDB6 213 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 GMCL1P1Q8NEA9 526 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 BAHD1Q8TBE0 780 aaPredicted RBP6.98□□□□□ -1.29
COPS3-216ENST00000579716 AGR3Q8TD06 166 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 RFFLQ8WZ73 363 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 WASF1Q92558 559 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 ATP6V0A1Q93050 837 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 HS6ST2Q96MM7 605 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 C7orf26Q96N11 449 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 NUDCD1Q96RS6 583 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 GCOM2Q9BZD3 368 aaPredicted RBP6.98□□□□□ -1.29
COPS3-216ENST00000579716 TSGA10Q9BZW7 698 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 INTS2Q9H0H0 1204 aaKnown RBP6.98□□□□□ -1.29
COPS3-216ENST00000579716 ZCWPW1Q9H0M4 648 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 CERS4Q9HA82 394 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 PARD6AQ9NPB6 346 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 GLRX2Q9NS18 164 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 SPATS2LQ9NUQ6 558 aaKnown RBP6.98□□□□□ -1.29
COPS3-216ENST00000579716 UBA2Q9UBT2 640 aaPredicted RBP6.98□□□□□ -1.29
COPS3-216ENST00000579716 EXOC7Q9UPT5 735 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 PCDHGB6Q9Y5F9 930 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 ATP6V1DQ9Y5K8 247 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 MRFAP1Q9Y605 127 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 KIF7Q2M1P5 1343 aa6.98□□□□□ -1.29
COPS3-216ENST00000579716 PI4KAP2A4QPH2 592 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 RGSL1A5PLK6 1076 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 FAM83GA6ND36 823 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 B2RBV5 119 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 M0R2C6 588 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 AP3D1O14617 1153 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 DAPK3O43293 454 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 OFD1O75665 1012 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 CHGBP05060 677 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 ASGR1P07306 291 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 QDPRP09417 244 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 BPIP17213 487 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 KCNA5P22460 613 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 EEF1GP26641 437 aaKnown RBP6.97□□□□□ -1.29
COPS3-216ENST00000579716 HOXD13P35453 343 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 IFI35P80217 286 aaPredicted RBP6.97□□□□□ -1.29
COPS3-216ENST00000579716 KRT17Q04695 432 aa6.97□□□□□ -1.29
COPS3-216ENST00000579716 SEMA5AQ13591 1074 aa6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms