RNA–Protein interactions for RNA: ENST00000576407.1

PRPF8-213, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-213ENST00000576407 PNMA6AP0CW24 399 aaPredicted RBP9.11□□□□□ -0.95
PRPF8-213ENST00000576407 CTSAP10619 480 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 ACAT1P24752 427 aaKnown RBP9.11□□□□□ -0.95
PRPF8-213ENST00000576407 NDST1P52848 882 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 JAM2P57087 298 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 ERVFC1P60507 584 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 ORC1Q13415 861 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 CAMK1Q14012 370 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 PTPN14Q15678 1187 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 PSMD5Q16401 504 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 CTXN3Q4LDR2 81 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 ZNF394Q53GI3 561 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 PDXDC1Q6P996 788 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 TMEM270Q6UE05 265 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 ANKS3Q6ZW76 656 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 CACNA2D4Q7Z3S7 1137 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 TMC7Q7Z402 723 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 TMC6Q7Z403 805 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 UNC93AQ86WB7 457 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 GPR65Q8IYL9 337 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 THEM5Q8N1Q8 247 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 TTC39CQ8N584 583 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 CPLX3Q8WVH0 158 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 AUTS2Q8WXX7 1259 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 PIK3R5Q8WYR1 880 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 BAP1Q92560 729 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 IQCDQ96DY2 449 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 SPAG5Q96R06 1193 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 TWNKQ96RR1 684 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 TCF25Q9BQ70 676 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 STK33Q9BYT3 514 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 GPR88Q9GZN0 384 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 TLR9Q9NR96 1032 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 MRPL17Q9NRX2 175 aaKnown RBP9.11□□□□□ -0.95
PRPF8-213ENST00000576407 MTRRQ9UBK8 725 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 CNTN6Q9UQ52 1028 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 STXBP5LQ9Y2K9 1186 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 PCDHB4Q9Y5E5 795 aa9.11□□□□□ -0.95
PRPF8-213ENST00000576407 TMEM265A0A087WTH1 108 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 H7C4K7 107 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 RFXAPO00287 272 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 FSCN2O14926 492 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 TBC1D4O60343 1298 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 LILRB3O75022 631 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 ATP2C2O75185 946 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 CSPG5O95196 566 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 CXCL14O95715 111 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 KRT5P13647 590 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 PCSK1P29120 753 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 CDC25BP30305 580 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 CASP14P31944 242 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 USP8P40818 1118 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 FXR1P51114 621 aaKnown RBP eCLIP9.1□□□□□ -0.952e-6■■■■□ 21.1
PRPF8-213ENST00000576407 RAD23BP54727 409 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 TBX2Q13207 712 aaPredicted RBP9.1□□□□□ -0.95
PRPF8-213ENST00000576407 TRIM14Q14142 442 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 ZNF280DQ6N043 979 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 RSPO2Q6UXX9 243 aaPredicted RBP9.1□□□□□ -0.95
PRPF8-213ENST00000576407 ARHGAP30Q7Z6I6 1101 aaPredicted RBP9.1□□□□□ -0.95
PRPF8-213ENST00000576407 ACOT1Q86TX2 421 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 PPFIBP1Q86W92 1011 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 DRC7Q8IY82 874 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 FAM71AQ8IYT1 594 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 MRPL43Q8N983 215 aaKnown RBP9.1□□□□□ -0.95
PRPF8-213ENST00000576407 SLC4A11Q8NBS3 891 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 RBBP8NLQ8NC74 664 aaPredicted RBP9.1□□□□□ -0.95
PRPF8-213ENST00000576407 OR10T2Q8NGX3 314 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 MICAL1Q8TDZ2 1067 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 GDPD5Q8WTR4 605 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 LRCH3Q96II8 777 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 TMEM209Q96SK2 561 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 SYT15Q9BQS2 421 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 ACBD6Q9BR61 282 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 NT5C1AQ9BXI3 368 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 OXCT2Q9BYC2 517 aaPredicted RBP9.1□□□□□ -0.95
PRPF8-213ENST00000576407 EDEM3Q9BZQ6 932 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 ELOVL4Q9GZR5 314 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 LMAN2LQ9H0V9 348 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 TTYH1Q9H313 450 aaPredicted RBP9.1□□□□□ -0.95
PRPF8-213ENST00000576407 DPEP3Q9H4B8 488 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 ENTPD7Q9NQZ7 604 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 CDH9Q9ULB4 789 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 CAPN11Q9UMQ6 739 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 SSX2IPQ9Y2D8 614 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 LUC7L2Q9Y383 392 aaKnown RBP9.1□□□□□ -0.95
PRPF8-213ENST00000576407 PCDHGC5Q9Y5F6 944 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 BACE2Q9Y5Z0 518 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 TRIOBPQ9H2D6 2365 aa9.1□□□□□ -0.95
PRPF8-213ENST00000576407 COL4A4P53420 1690 aaPredicted RBP9.1□□□□□ -0.95
PRPF8-213ENST00000576407 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.09□□□□□ -0.95
PRPF8-213ENST00000576407 C2orf71A6NGG8 1288 aa9.09□□□□□ -0.95
PRPF8-213ENST00000576407 OR6C75A6NL08 312 aa9.09□□□□□ -0.95
PRPF8-213ENST00000576407 LRRC53A6NM62 1247 aa9.09□□□□□ -0.95
PRPF8-213ENST00000576407 HIDE1A8MVS5 230 aa9.09□□□□□ -0.95
PRPF8-213ENST00000576407 CYP26A1O43174 497 aa9.09□□□□□ -0.95
PRPF8-213ENST00000576407 ADAM12O43184 909 aa9.09□□□□□ -0.95
PRPF8-213ENST00000576407 LPXNO60711 386 aa9.09□□□□□ -0.95
PRPF8-213ENST00000576407 GFPT2O94808 682 aa9.09□□□□□ -0.95
PRPF8-213ENST00000576407 OR4Q2P0C623 313 aa9.09□□□□□ -0.95
PRPF8-213ENST00000576407 PTPN1P18031 435 aaKnown RBP9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms